RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 COQ3Q9NZJ6 369 aa16.48■□□□□ 0.23
LINC00960-201ENST00000463183 BAIAP2L1Q9UHR4 511 aa16.48■□□□□ 0.23
LINC00960-201ENST00000463183 CELSR2Q9HCU4 2923 aa16.48■□□□□ 0.23
LINC00960-201ENST00000463183 C15orf38-AP3S2A0A0A6YYH1 394 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 MYO1GB0I1T2 1018 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 ACOX3O15254 700 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 CTIFO43310 598 aaKnown RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 UGT2B11O75310 529 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 ERN1O75460 977 aaKnown RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 SKAP2O75563 359 aaPredicted RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 BCAS2O75934 225 aaPredicted RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 IGHG3P01860 377 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 NEFHP12036 1026 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 PPICP45877 212 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 DCAF7P61962 342 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 ANGPTL8Q6UXH0 198 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 NUDCD3Q8IVD9 361 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 CLYBLQ8N0X4 340 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 SLC34A3Q8N130 599 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 MARVELD2Q8N4S9 558 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 FAM76AQ8TAV0 307 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 CA5BP1Q8WTZ4 195 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 MARVELD3Q96A59 401 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 GNRHR2Q96P88 292 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 GLIPR2Q9H4G4 154 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 GALNT9Q9HCQ5 603 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 DDX18Q9NVP1 670 aaKnown RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 SPRR3Q9UBC9 169 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 EXO1Q9UQ84 846 aaKnown RBP16.47■□□□□ 0.23
LINC00960-201ENST00000463183 OR10H1Q9Y4A9 318 aa16.47■□□□□ 0.23
LINC00960-201ENST00000463183 FRG2CA6NGY1 282 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 AQP7O14520 342 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 BCKDKO14874 412 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 TYROBPO43914 113 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 TRIM3O75382 744 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 CLDN14O95500 239 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 TUBBP07437 444 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 BPGMP07738 259 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 SDC1P18827 310 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 ENDOUP21128 410 aaKnown RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 DRD5P21918 477 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 KRT20P35900 424 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 RFX3P48380 749 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 PMPCAQ10713 525 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 HSPB3Q12988 150 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 KIAA0040Q15053 153 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 RFTN2Q52LD8 501 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 NPSR1Q6W5P4 371 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 IKBIPQ70UQ0 350 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 SZRD1Q7Z422 152 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 WDR53Q7Z5U6 358 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 SLC44A2Q8IWA5 706 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 OR10Q1Q8NGQ4 319 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 PHF10Q8WUB8 498 aaKnown RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 CIDECQ96AQ7 238 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 SARAFQ96BY9 339 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 EFHD2Q96C19 240 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 ZIM3Q96PE6 472 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 ADOQ96SZ5 270 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 OSBPL11Q9BXB4 747 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 ANGPTL4Q9BY76 406 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 TAS2R9Q9NYW1 312 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 SH3BP4Q9P0V3 963 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 RAB21Q9UL25 225 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 MAPRE3Q9UPY8 281 aa16.46■□□□□ 0.23
LINC00960-201ENST00000463183 GPR55Q9Y2T6 319 aaPredicted RBP16.46■□□□□ 0.23
LINC00960-201ENST00000463183 NCKAP5O14513 1909 aa16.46■□□□□ 0.22
LINC00960-201ENST00000463183 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 PRAMEF25A6NGN4 478 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 FIGNL2A6NMB9 653 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 FAM90A27PA6NNH2 459 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 PDPK1O15530 556 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 PEX11AO75192 247 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 COQ9O75208 318 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 LYPLA1O75608 230 aaPredicted RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 SNX4O95219 450 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 EFNA1P20827 205 aaPredicted RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 PRPH2P23942 346 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 ACVR2AP27037 513 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 IL12BP29460 328 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 ARRB2P32121 409 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 GPC1P35052 558 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 NUP107P57740 925 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 CEBPEQ15744 281 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 ZNF630Q2M218 657 aaPredicted RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 WLSQ5T9L3 541 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 TMEM211Q6ICI0 200 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 ZNF551Q7Z340 670 aaPredicted RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 NUP54Q7Z3B4 507 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 CCDC71Q8IV32 467 aaPredicted RBP16.45■□□□□ 0.22
LINC00960-201ENST00000463183 OR4N2Q8NGD1 307 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 HGDQ93099 445 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 PPCDCQ96CD2 204 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 VSTM2LQ96N03 204 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 AMDHD1Q96NU7 426 aa16.45■□□□□ 0.22
LINC00960-201ENST00000463183 COL21A1Q96P44 957 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms