RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 SPPL2AQ8TCT8 520 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 ACTRT2Q8TDY3 377 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 OR5P2Q8WZ92 322 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
HPS1-206ENST00000462743 GPR137Q96N19 417 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 C1orf50Q9BV19 199 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 NUF2Q9BZD4 464 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
HPS1-206ENST00000462743 OR6C70A6NIJ9 312 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 ABCB7O75027 752 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 ERN1O75460 977 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 WISP2O76076 250 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 STSP08842 583 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 MC3RP41968 323 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 PNLIPRP2P54317 469 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 DIO3P55073 304 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 RPP38P78345 283 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 PSG6Q00889 435 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 SRSF11Q05519 484 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
HPS1-206ENST00000462743 ELOAQ14241 798 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 RPS6KA2Q15349 733 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 EXOSC6Q5RKV6 272 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 ANKRD26P1Q6NSI1 321 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 ZCCHC12Q6PEW1 402 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 TMEM64Q6YI46 380 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 GK5Q6ZS86 529 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 SPATA19Q7Z5L4 167 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 SLC34A3Q8N130 599 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 OR7A2PQ8NGA2 310 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 OR10G3Q8NGC4 313 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 OR8J2Q8NGG1 315 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 HGDQ93099 445 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 CIDECQ96AQ7 238 aaPredicted RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 TESCQ96BS2 214 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 SLC35A4Q96G79 324 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 LMF2Q9BU23 707 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 ANGPTL4Q9BY76 406 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 BHLHE41Q9C0J9 482 aaPredicted RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 IL1RL2Q9HB29 575 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 FOLH1BQ9HBA9 442 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 C3orf14Q9HBI5 128 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 INTS9Q9NV88 658 aaKnown RBP11.11□□□□□ -0.63
HPS1-206ENST00000462743 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 SEC14L3Q9UDX4 400 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 ZNF835Q9Y2P0 537 aa11.11□□□□□ -0.63
HPS1-206ENST00000462743 PTPN13Q12923 2485 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 PCNX3Q9H6A9 2034 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 PINLYPA6NC86 204 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 EMC8O43402 210 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 ATP8B1O43520 1251 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 TSPAN2O60636 221 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 SCN2BO60939 215 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 TRIM3O75382 744 aaPredicted RBP11.1□□□□□ -0.63
HPS1-206ENST00000462743 SOX30O94993 753 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 SNX4O95219 450 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 TGDSO95455 350 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 ZNF24P17028 368 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 SNTA1Q13424 505 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 DPY19L1Q2PZI1 675 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 CYP27C1Q4G0S4 372 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 TMEM107Q6UX40 140 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 GFRALQ6UXV0 394 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 NPSR1Q6W5P4 371 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 Q6ZPB1 254 aaPredicted RBP11.1□□□□□ -0.63
HPS1-206ENST00000462743 CHERPQ8IWX8 916 aaKnown RBP11.1□□□□□ -0.63
HPS1-206ENST00000462743 FAM26EQ8N5C1 309 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 KRTCAP2Q8N6L1 136 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 LRRC8CQ8TDW0 803 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 RNF138Q8WVD3 245 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 RELTQ969Z4 430 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 OMA1Q96E52 524 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 ZDHHC11Q9H8X9 412 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 SIRT3Q9NTG7 399 aaPredicted RBP11.1□□□□□ -0.63
HPS1-206ENST00000462743 QPCTLQ9NXS2 382 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.1□□□□□ -0.63
HPS1-206ENST00000462743 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
HPS1-206ENST00000462743 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
HPS1-206ENST00000462743 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 WIPF3A6NGB9 483 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 NPIPA5E9PKD4 350 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 RNASET2O00584 256 aaKnown RBP11.09□□□□□ -0.63
HPS1-206ENST00000462743 NKX2-2O95096 273 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 UNC5CO95185 931 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 EPHA3P29320 983 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 PIGAP37287 484 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 CASP3P42574 277 aa11.09□□□□□ -0.63
HPS1-206ENST00000462743 CDK9P50750 372 aaKnown RBP11.09□□□□□ -0.63
HPS1-206ENST00000462743 CLNS1AP54105 237 aaKnown RBP11.09□□□□□ -0.63
HPS1-206ENST00000462743 WNT3P56703 355 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms