RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 BIKQ13323 160 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 MPP2Q14168 576 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF791Q3KP31 576 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SPIN4Q56A73 249 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CFAP157Q5JU67 520 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CEP85LQ5SZL2 805 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CCNYL2Q5T2Q4 361 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RIPPLY2Q5TAB7 128 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 KANK2Q63ZY3 851 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC48A1Q6P1K1 146 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 GALNT18Q6P9A2 607 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 POMZP3Q6PJE2 187 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ARSKQ6UWY0 536 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 LRIG3Q6UXM1 1119 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RNF165Q6ZSG1 346 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM47EQ6ZV65 393 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF441Q8N8Z8 693 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR2T11Q8NH01 316 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 C16orf78Q8WTQ4 265 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CNRIP1Q96F85 164 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SENP5Q96HI0 755 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 FBXL20Q96IG2 436 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 FCRL1Q96LA6 429 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SGCZQ96LD1 299 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF681Q96N22 645 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ALPK1Q96QP1 1244 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 TRMOQ9BU70 441 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 EBPLQ9BY08 206 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 POLDIP3Q9BY77 421 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 IQCGQ9H095 443 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC6A15Q9H2J7 730 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CXorf21Q9HAI6 301 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC24A3Q9HC58 644 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SSU72Q9NP77 194 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RRAGDQ9NQL2 400 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RASSF1Q9NS23 344 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SACM1LQ9NTJ5 587 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 AHSPQ9NZD4 102 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SENP1Q9P0U3 644 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 EXO1Q9UQ84 846 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ERVK-19Q9WJR5 959 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 PLEKHA6Q9Y2H5 1048 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CLCA3PQ9Y6N3 262 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CUBNO60494 3623 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 SONP18583 2426 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RTTNQ86VV8 2226 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 TRGV5A0A0B4J1U4 118 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 C1orf226A1L170 272 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 A6NNC1 897 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 HCN1O60741 890 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 RSL1D1O76021 490 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC35E2P0CK97 266 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 CPMP14384 443 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 COX7A2P14406 83 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 S1PR1P21453 382 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PIK3R1P27986 724 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SSTR4P31391 388 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SERPINB4P48594 390 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 MAN2A2P49641 1150 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 WNT3P56703 355 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SLC37A1P57057 533 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 BTKQ06187 659 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ACSM2AQ08AH3 577 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 MGAT2Q10469 447 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ASPHQ12797 758 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 DUSP8Q13202 625 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 KIAA0040Q15053 153 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 EBPQ15125 230 aaKnown RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 LTB4RQ15722 352 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 MPEG1Q2M385 716 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 UGT3A2Q3SY77 523 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 FLYWCH1Q4VC44 716 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PIGGQ5H8A4 983 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ARL13AQ5H913 290 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PRAMEF20Q5VT98 475 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ACSM2BQ68CK6 577 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM71E1Q6IPT2 247 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 FAM180BQ6P0A1 224 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 OPN5Q6U736 354 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PAMR1Q6UXH9 720 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 Q6ZSR9 355 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 WDR53Q7Z5U6 358 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 CDC20BQ86Y33 519 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ULK2Q8IYT8 1036 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 LRRC25Q8N386 305 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 FBXW8Q8N3Y1 598 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 ZNF615Q8N8J6 731 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SIMC1Q8NDZ2 872 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 CHDHQ8NE62 594 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 OR4K14Q8NGD5 310 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 NUBPLQ8TB37 319 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 PAQR8Q8TEZ7 354 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 SARAFQ96BY9 339 aa7.26□□□□□ -1.25
CDC42BPA-210ENST00000462553 MBD6Q96DN6 1003 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms