RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SH3BGRLO75368 114 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 BCAS2O75934 225 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CLDN9O95484 217 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 LY6G6DO95868 133 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CD8BP10966 210 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GFAPP14136 432 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CD79BP40259 229 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 XKP51811 444 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 HMGCS1Q01581 520 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 MGAT2Q10469 447 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GTF2H2Q13888 395 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 TOMM20Q15388 145 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CPSF6Q16630 551 aaKnown RBP eCLIP13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 KBTBD12Q3ZCT8 623 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GTF2H2CQ6P1K8 395 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 KLC3Q6P597 504 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 TMEM64Q6YI46 380 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GOLGA7Q7Z5G4 137 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 GRAMD2AQ8IUY3 354 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 OR14L1PQ8NHC6 308 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 TMCO6Q96DC7 493 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CCL19Q99731 98 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 IPPKQ9H8X2 491 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 BRF2Q9HAW0 419 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 SAYSD1Q9NPB0 183 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 TAS2R10Q9NYW0 307 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 CES1P1Q9UKY3 287 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 ZNF175Q9Y473 711 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
DNMT3A-207ENST00000461228 A0A1W2PS29 197 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 STX16O14662 325 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 PGRMC2O15173 223 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 UGT2B11O75310 529 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 PIAS1O75925 651 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 CBX7O95931 251 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 FCGR2AP12318 317 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 CSNK2A2P19784 350 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 NT5EP21589 574 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 CPOXP36551 454 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 GPX6P59796 221 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 TRA2BP62995 288 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 MRPS22P82650 360 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 CAV1Q03135 178 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 EFR3AQ14156 821 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 ACKR1Q16570 336 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 PFKFB4Q16877 469 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 CXXC5Q7LFL8 322 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 GCNT2Q8N0V5 402 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 INTS12Q96CB8 462 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 NODALQ96S42 347 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 GALNT9Q9HCQ5 603 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 PRM3Q9NNZ6 103 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 SERHLQ9NQF3 203 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 SAR1BQ9Y6B6 198 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 RTTNQ86VV8 2226 aa13.18□□□□□ -0.3
DNMT3A-207ENST00000461228 LRRC14BA6NHZ5 514 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 SLC22A20A6NK97 555 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 H7C1Q1 480 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 EMC8O43402 210 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 SLITRK5O94991 958 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 KLHL2O95198 593 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 PPP3CBP16298 524 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 UGT2B10P36537 528 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 GMPRP36959 345 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 EMDP50402 254 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 MAPK12P53778 367 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 EEFSECP57772 596 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 PPP2R2BQ00005 443 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 TRAF3Q13114 568 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 POU4F3Q15319 338 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 COMMD6Q7Z4G1 85 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 YTHDF3Q7Z739 585 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 TRIM42Q8IWZ5 723 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 CTAGE3PQ8IX95 158 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 PRR22Q8IZ63 422 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 SLC44A1Q8WWI5 657 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 Q96MF0 132 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 SFXN2Q96NB2 322 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 COL21A1Q96P44 957 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 SLC39A3Q9BRY0 314 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 OR10A4Q9H209 315 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 RNF122Q9H9V4 155 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 GRHL1Q9NZI5 618 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 PSME2Q9UL46 239 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 ABCG2Q9UNQ0 655 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 MAPRE3Q9UPY8 281 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 GPR55Q9Y2T6 319 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 PLLPQ9Y342 182 aa13.17□□□□□ -0.3
DNMT3A-207ENST00000461228 WASHC1A8K0Z3 465 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms