RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 LCN1P1Q5VSP4 162 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 PRAMEF9Q5VWM5 478 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 MEDAGQ5VYS4 303 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 ASB18Q6ZVZ8 466 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 OR6Q1Q8NGQ2 317 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 WDR92Q96MX6 357 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 OR5M11Q96RB7 305 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 SLC38A3Q99624 504 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 MS4A8Q9BY19 250 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 TMEM184CQ9NVA4 438 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 TMEFF2Q9UIK5 374 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 CARD8Q9Y2G2 431 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 PDCD11Q14690 1871 aaKnown RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 IGLV3-16A0A075B6K0 115 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 J3QLW9 94 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 UPK1AO00322 258 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 SLITRK5O94991 958 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 OXSR1O95747 527 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 ADORA3P0DMS8 318 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 BMP4P12644 408 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 ZNF19P17023 458 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 HIST1H1TP22492 207 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 GABRA3P34903 492 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 TBCEQ15813 527 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 C11orf91Q3C1V1 193 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 CALHM3Q86XJ0 350 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 IZUMO1Q8IYV9 350 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 LRRC25Q8N386 305 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 METTL27Q8N6F8 245 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-204ENST00000460696 RPLP0P6Q8NHW5 317 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 GNPDA2Q8TDQ7 276 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 TM4SF18Q96CE8 201 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 LGR4Q9BXB1 951 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 SLC6A17Q9H1V8 727 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 TAAR2Q9P1P5 351 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 PSORS1C1Q9UIG5 152 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 SH2B3Q9UQQ2 575 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 LIPT1Q9Y234 373 aa10.99□□□□□ -0.65
NPHP4-204ENST00000460696 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 CLEC3AO75596 197 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 GABARAPO95166 117 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 C1QCP02747 245 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 MTNR1AP48039 350 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 ANGPT1Q15389 498 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 ZNF791Q3KP31 576 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 OSTF1Q92882 214 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 APOOQ9BUR5 198 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 GPR174Q9BXC1 333 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 MBNL1Q9NR56 388 aaKnown RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NDRG4Q9ULP0 352 aaKnown RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 A0A0G2JMZ2 1700 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 C2CD4DB7Z1M9 353 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 PPM1DO15297 605 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 AGR2O95994 175 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 HLA-DPB1P04440 258 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SLC2A2P11168 524 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 BMP8BP34820 402 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NKX2-5P52952 324 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 AQP6Q13520 282 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 DEFB110Q30KQ9 67 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 C18orf63Q68DL7 685 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 BMP8AQ7Z5Y6 402 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 PLPP6Q8IY26 295 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 PJA1Q8NG27 643 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 RHOXF1Q8NHV9 184 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 FAM210AQ96ND0 272 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 CENPOQ9BU64 300 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 KCNN2Q9H2S1 579 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 DUSP21Q9H596 190 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SMURF1Q9HCE7 757 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 MED31Q9Y3C7 131 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 MTCH2Q9Y6C9 303 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NPIPA5A0A0B4J1W7 369 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NPIPA7E9PJI5 369 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NPIPA8P0DM63 369 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 IDUAP35475 653 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 WNT3P56703 355 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 RPL6Q02878 288 aaKnown RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 GPR19Q15760 415 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 CCNJQ5T5M9 372 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 ZNF517Q6ZMY9 492 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 ATOH1Q92858 354 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-204ENST00000460696 FGF14Q92915 247 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 COQ7Q99807 217 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SLITRK2Q9H156 845 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 EPHX3Q9H6B9 360 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 RNF167Q9H6Y7 350 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 IL21RQ9HBE5 538 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 TRPV5Q9NQA5 729 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SIRT5Q9NXA8 310 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 TAS2R7Q9NYW3 318 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 NLGN3Q9NZ94 848 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 ZNF222Q9UK12 451 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SPATA2Q9UM82 520 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 SNX11Q9Y5W9 270 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 CSNK1G3Q9Y6M4 447 aa10.98□□□□□ -0.65
NPHP4-204ENST00000460696 CAPNS1P04632 268 aa10.97□□□□□ -0.65
NPHP4-204ENST00000460696 IGFBP1P08833 259 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms