RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 CCDC116Q8IYX3 515 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 OR2L13Q8N349 312 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 CAMKK1Q8N5S9 505 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 KCT2Q8NC54 265 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 BPIFB6Q8NFQ5 453 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 GPR32P1Q8NGA4 272 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 ADAMTS15Q8TE58 950 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
ERCC3-205ENST00000460485 RAB8BQ92930 207 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 TMIGD2Q96BF3 282 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 Q96MT0 163 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 PRRG3Q9BZD7 231 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 RACGAP1Q9H0H5 632 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 PNMA8BQ9ULN7 279 aaPredicted RBP13.24□□□□□ -0.29
ERCC3-205ENST00000460485 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 IGF2RP11717 2491 aa13.24□□□□□ -0.29
ERCC3-205ENST00000460485 CCDC163A0A0D9SF12 145 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 HYKKA2RU49 373 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 PRAMEF25A6NGN4 478 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 H0YGG7 62 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 H3BMQ9 156 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 PPM1DO15297 605 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CTSVO60911 334 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 RECKO95980 971 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CSF2P04141 144 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 OSMP13725 252 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CPMP14384 443 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 PCMT1P22061 227 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ELAVL4P26378 380 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 MC3RP41968 323 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 YAP1P46937 504 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ST13P50502 369 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 EPHA4P54764 986 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CASP9P55211 416 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 RAB38P57729 211 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ARF3P61204 181 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 RACK1P63244 317 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ILKQ13418 452 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 TCEA2Q15560 299 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 TBCEQ15813 527 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 RPS26P11Q5JNZ5 115 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 SYT6Q5T7P8 510 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 C18orf63Q68DL7 685 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 LAIR2Q6ISS4 152 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 TCTN3Q6NUS6 607 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 MFSD12Q6NUT3 480 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 TMEM107Q6UX40 140 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 WDR5BQ86VZ2 330 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ENTHD1Q8IYW4 607 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 AQP11Q8NBQ7 271 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 RHOXF1Q8NHV9 184 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 FAM81AQ8TBF8 368 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 KLHL6Q8WZ60 621 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 SPACA7Q96KW9 195 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 COG8Q96MW5 612 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 OR7D2Q96RA2 312 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 SIGLEC11Q96RL6 698 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CD180Q99467 661 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 STACQ99469 402 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 UCK2Q9BZX2 261 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 ARRDC1-AS1Q9H2J1 176 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 NMNAT1Q9HAN9 279 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 CNOT2Q9NZN8 540 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 EPHA6Q9UF33 1036 aa13.23□□□□□ -0.29
ERCC3-205ENST00000460485 MRPS33Q9Y291 106 aaKnown RBP13.23□□□□□ -0.29
ERCC3-205ENST00000460485 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ZAR1LA6NP61 321 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 SLC22A1O15245 554 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 PLOD3O60568 738 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 COQ9O75208 318 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 THBS1P07996 1170 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 HTR1AP08908 422 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 PIPP12273 146 aaPredicted RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 AGXTP21549 392 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 CD38P28907 300 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FEN1P39748 380 aaKnown RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 XKP51811 444 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 CRISP1P54107 249 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 EMP3P54852 163 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 OLR1P78380 273 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms