RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RPS21P63220 83 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF33BQ06732 778 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 DEFB134Q4QY38 66 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ENTHD1Q8IYW4 607 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 HMGB4Q8WW32 186 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 OR5P2Q8WZ92 322 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 TMEM203Q969S6 136 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 EPHX3Q9H6B9 360 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ADAP2Q9NPF8 381 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 SPINT1O43278 529 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 TLX2O43763 284 aaPredicted RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 GASTP01350 101 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ACADLP28330 430 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 RBBP4Q09028 425 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 PTGES3Q15185 160 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 MICAQ29983 383 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 MPEG1Q2M385 716 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 PIP5KL1Q5T9C9 394 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 METRNLQ641Q3 311 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 KLHL17Q6TDP4 642 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 BCDIN3DQ7Z5W3 292 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 PJA1Q8NG27 643 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ADAMTS15Q8TE58 950 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 NMNAT1Q9HAN9 279 aaPredicted RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 C1GALT1Q9NS00 363 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 GPATCH2Q9NW75 528 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 CCDC59Q9P031 241 aaKnown RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 THAP10Q9P2Z0 257 aaPredicted RBP14.55□□□□□ -0.08
LMNB1-203ENST00000460265 ENPP4Q9Y6X5 453 aa14.55□□□□□ -0.08
LMNB1-203ENST00000460265 POM121BA6NF01 834 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 H3BQ06 376 aaPredicted RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 DSCR3O14972 297 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PGRMC2O15173 223 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PDE9AO76083 593 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SNX4O95219 450 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PAPLNO95428 1278 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 CFL1P23528 166 aaKnown RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 CMPK1P30085 196 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 EFR3AQ14156 821 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PLCZ1Q86YW0 608 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PHOSPHO2Q8TCD6 241 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 OR51E2Q9H255 320 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 TBC1D24Q9ULP9 559 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 NDRG2Q9UN36 371 aaKnown RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 TANC1Q9C0D5 1861 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SCN8AQ9UQD0 1980 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 TRBV4-1A0A0J9YWV2 114 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 DRD3P35462 400 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SNAPC1Q16533 368 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PROX2Q3B8N5 592 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 C18orf63Q68DL7 685 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 LAS2Q8IYD9 372 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 KCT2Q8NC54 265 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 OR9Q1Q8NGQ5 310 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 C7orf34Q96L11 122 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 OR2A14Q96R47 310 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SPHK1Q9NYA1 384 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 GDE1Q9NZC3 331 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 EFCAB10A6NFE3 127 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 ICAM2P13598 275 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 UGT2B10P36537 528 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 PRDX1Q06830 199 aaKnown RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 DBPQ10586 325 aaPredicted RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 GPR19Q15760 415 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 IQCCQ4KMZ1 466 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 CCL4L1Q8NHW4 92 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 C16orf58Q96GQ5 468 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 FRMD6Q96NE9 622 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 MYADMQ96S97 322 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 CCDC3Q9BQI4 270 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 CCDC32Q9BV29 185 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 MS4A8Q9BY19 250 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 NEUROD4Q9HD90 331 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SLAMF7Q9NQ25 335 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 SLC35C2Q9NQQ7 365 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 P2RX2Q9UBL9 471 aa14.54□□□□□ -0.08
LMNB1-203ENST00000460265 TCF20Q9UGU0 1960 aaKnown RBP14.54□□□□□ -0.08
LMNB1-203ENST00000460265 TSPAN11A1L157 253 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 C1orf226A1L170 272 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 STK25O00506 426 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 HMGN2P05204 90 aaKnown RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF250P15622 560 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 C5AR1P21730 350 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 TGFBR2P37173 567 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 XKP51811 444 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 MRPL28Q13084 256 aaKnown RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 PRSS53Q2L4Q9 553 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CRB2Q5IJ48 1285 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 RNF31Q96EP0 1072 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 SNX7Q9UNH6 387 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 COLEC10Q9Y6Z7 277 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 HEATR5BQ9P2D3 2071 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 LRRC72A6NJI9 287 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 POU3F3P20264 500 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 SIM1P81133 766 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 DPTQ07507 201 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 C1orf61Q13536 156 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 IQCHQ86VS3 1027 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CAMKK1Q8N5S9 505 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms