RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KLHL29Q96CT2 875 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 PAIP1Q9H074 479 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 RPF2Q9H7B2 306 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 ACTR5Q9H9F9 607 aaPredicted RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 CTSFQ9UBX1 484 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 PISDQ9UG56 409 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 ACSL6Q9UKU0 697 aa9.68□□□□□ -0.86
USP39-210ENST00000459775 CNOT1A5YKK6 2376 aaKnown RBP9.68□□□□□ -0.86
USP39-210ENST00000459775 TXNDC9O14530 226 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GYG2O15488 501 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 NSA2O95478 260 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 UBTFL6P0CB48 400 aaPredicted RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 MAOAP21397 527 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PTPN6P29350 595 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 XCR1P46094 333 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GDI2P50395 445 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 MTPNP58546 118 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 HBA1P69905 142 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TNFRSF17Q02223 184 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 FOLH1Q04609 750 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 HSPB3Q12988 150 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TARDBPQ13148 414 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP39-210ENST00000459775 STX5Q13190 355 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 FAM53BQ14153 422 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 LTB4RQ15722 352 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 NDUFA9Q16795 377 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 FAM214AQ32MH5 1076 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 C3orf38Q5JPI3 329 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PGM2L1Q6PCE3 622 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 DGAT2L6Q6ZPD8 337 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TSPYL5Q86VY4 417 aaPredicted RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 PPP1R3BQ86XI6 285 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 CDH26Q8IXH8 852 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GLB1L3Q8NCI6 653 aaPredicted RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 OR8J2Q8NGG1 315 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 ADAMTS14Q8WXS8 1223 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 MAGED4Q96JG8 741 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PIP5K1AQ99755 562 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 BTBD10Q9BSF8 475 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 WDR41Q9HAD4 459 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 NDUFA13Q9P0J0 144 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TRPC4Q9UBN4 977 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PCDHB14Q9Y5E9 798 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PCDHGA7Q9Y5G6 932 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GSC2O15499 205 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 ANXA8P13928 327 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 SELLP14151 372 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PTPN4P29074 926 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 CCKBRP32239 447 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 HTR2BP41595 481 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TSFMP43897 325 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 CDK9P50750 372 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 E2F1Q01094 437 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 SRSF11Q05519 484 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 GAB1Q13480 694 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 DSG2Q14126 1118 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 ANXA8L1Q5VT79 327 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GARNL3Q5VVW2 1013 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 SLC48A1Q6P1K1 146 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 ZNF621Q6ZSS3 439 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 YTHDF3Q7Z739 585 aaKnown RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 DHDDSQ86SQ9 333 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 LRRC58Q96CX6 371 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PANX1Q96RD7 426 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 CDRT15Q96T59 188 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 CMKLR1Q99788 373 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 THTPAQ9BU02 230 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 SLC35C2Q9NQQ7 365 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 TBCCD1Q9NVR7 557 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 IFT80Q9P2H3 777 aaPredicted RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 LEF1Q9UJU2 399 aaPredicted RBP9.67□□□□□ -0.86
USP39-210ENST00000459775 PSME2Q9UL46 239 aa9.67□□□□□ -0.86
USP39-210ENST00000459775 PRSS51A0A1B0GVH4 220 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 A0A1B0GX78 115 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 C1orf226A1L170 272 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 NDUFS8O00217 210 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 RFXANKO14593 260 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 CNOT3O75175 753 aaKnown RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 KRT16P08779 473 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 TCN1P20061 433 aaPredicted RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 BUD31P41223 144 aaPredicted RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 AVPR1BP47901 424 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 SLC7A2P52569 658 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 PCBP4P57723 403 aaKnown RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 PSME3P61289 254 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 TRA2BP62995 288 aaKnown RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 MC2RQ01718 297 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 ILKQ13418 452 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 TRA2AQ13595 282 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP39-210ENST00000459775 AANATQ16613 207 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 COL28A1Q2UY09 1125 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 CLVS2Q5SYC1 327 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 COX15Q7KZN9 410 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 OR7G1Q8NGA0 311 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 OR4A15Q8NGL6 344 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 SUN3Q8TAQ9 357 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 WDR60Q8WVS4 1066 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms