RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GNGT2O14610 69 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ACOX3O15254 700 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SOX30O94993 753 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 IFNA16P05015 189 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ATP6V1C1P21283 382 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 HPCAP84074 193 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 FUT7Q11130 342 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 DUSP8Q13202 625 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 ARHGAP11BQ3KRB8 267 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 NKAIN1Q4KMZ8 207 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 VWA2Q5GFL6 755 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SLC38A9Q8NBW4 561 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 PRSS33Q8NF86 280 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 BTBD9Q96Q07 612 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 CDC6Q99741 560 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SLC22A11Q9NSA0 550 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SEC14L3Q9UDX4 400 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 SATB2Q9UPW6 733 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 PCDHGB3Q9Y5G1 929 aa22.77■■□□□ 1.24
U2AF1-204ENST00000459639 A8MVJ9 347 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 POLR1CO15160 346 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-204ENST00000459639 PRAMEF2O60811 474 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF23P17027 643 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 HSPA13P48723 471 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 MC2RQ01718 297 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF155Q12901 538 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF267Q14586 743 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-204ENST00000459639 IQCCQ4KMZ1 466 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF385CQ66K41 422 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-204ENST00000459639 OR2T5Q6IEZ7 315 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 GALNT4Q8N4A0 578 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 CBR4Q8N4T8 237 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 CHDHQ8NE62 594 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-204ENST00000459639 OR2T29Q8NH02 315 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 SLC29A1Q99808 456 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 SLC38A1Q9H2H9 487 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 FBXO8Q9NRD0 319 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 THSD1Q9NS62 852 aa22.76■■□□□ 1.23
U2AF1-204ENST00000459639 SOCS2O14508 198 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 DPM1O60762 260 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 RASAL1O95294 804 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 AK1P00568 194 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 KCNJ5P48544 419 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 DCDP81605 110 aaKnown RBP22.75■■□□□ 1.23
U2AF1-204ENST00000459639 DUSP7Q16829 419 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 SVOPLQ8N434 492 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 TSLPQ969D9 159 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 LMF2Q9BU23 707 aaKnown RBP22.75■■□□□ 1.23
U2AF1-204ENST00000459639 C14orf105Q9NVL8 296 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 CTSFQ9UBX1 484 aa22.75■■□□□ 1.23
U2AF1-204ENST00000459639 TCRBV16S1A1N1A0A5B0 115 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 NKX2-2O95096 273 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 ITGA2P17301 1181 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 TNNI3P19429 210 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 SSTR4P31391 388 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 E2F1Q01094 437 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 GPR32P1Q8NGA4 272 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 PROX1Q92786 737 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF597Q96LX8 424 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 CNPPD1Q9BV87 410 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 FOLH1BQ9HBA9 442 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 AKAP7Q9P0M2 348 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 NCDNQ9UBB6 729 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 ERVK-19Q9WJR5 959 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 HEMK1Q9Y5R4 338 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 C17orf105B2RV13 164 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 PDLIM1O00151 329 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 CPNE3O75131 537 aaKnown RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 RFPL3O75679 317 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 FESP07332 822 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 EMDP50402 254 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 KCNC4Q03721 635 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 OCA2Q04671 838 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 ZNHIT3Q15649 155 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 NRF1Q16656 503 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 MLIPQ5VWP3 458 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 OLIG3Q7RTU3 272 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 COX18Q8N8Q8 333 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 PLPP5Q8NEB5 264 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 OR7G1Q8NGA0 311 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 APOBEC4Q8WW27 367 aaKnown RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 SDCCAG3Q96C92 435 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 NAF1Q96HR8 494 aaKnown RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 COL25A1Q9BXS0 654 aaPredicted RBP22.74■■□□□ 1.23
U2AF1-204ENST00000459639 VN1R1Q9GZP7 353 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 PCDHGA8Q9Y5G5 932 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 AK5Q9Y6K8 562 aa22.74■■□□□ 1.23
U2AF1-204ENST00000459639 C4orf47A7E2U8 309 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 HRKO00198 91 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 DYRK3O43781 588 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 RECKO95980 971 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 TNFRSF1BP20333 461 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 PGDP52209 483 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 CHRNEQ04844 493 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 ELAVL1Q15717 326 aaKnown RBP22.73■■□□□ 1.23
U2AF1-204ENST00000459639 ZDHHC13Q8IUH4 622 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 OR5K1Q8NHB7 308 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 STT3BQ8TCJ2 826 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 GPR151Q8TDV0 419 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 PTPMT1Q8WUK0 201 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms