RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 TMED5Q9Y3A6 229 aa17.17■□□□□ 0.34
USP39-209ENST00000458268 OR10H1Q9Y4A9 318 aa17.17■□□□□ 0.34
USP39-209ENST00000458268 SPTAN1Q13813 2472 aaKnown RBP17.16■□□□□ 0.34
USP39-209ENST00000458268 DNAJC13O75165 2243 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 C2orf72A6NCS6 295 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 NPIPA2E9PIF3 369 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 NPIPA3F8WFD2 350 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 COQ9O75208 318 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 FREM3P0C091 2139 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 GDF1P27539 372 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 COL8A1P27658 744 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 IL12BP29460 328 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 PPICP45877 212 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 ASMTP46597 345 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 TRPC1P48995 793 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 PRKAG1P54619 331 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.16■□□□□ 0.34
USP39-209ENST00000458268 XKR7Q5GH72 579 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 TNFAIP8L3Q5GJ75 292 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 IL23RQ5VWK5 629 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 RNF165Q6ZSG1 346 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 FGD2Q7Z6J4 655 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 SLC34A3Q8N130 599 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 FAM109AQ8N4B1 249 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 SPPL2AQ8TCT8 520 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 HSPBAP1Q96EW2 488 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 CCDC120Q96HB5 630 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 AMDHD1Q96NU7 426 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
USP39-209ENST00000458268 ASH1LQ9NR48 2969 aaKnown RBP17.16■□□□□ 0.34
USP39-209ENST00000458268 WBP11Q9Y2W2 641 aaKnown RBP17.16■□□□□ 0.34
USP39-209ENST00000458268 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
USP39-209ENST00000458268 FRG2CA6NGY1 282 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 TRAPPC6AO75865 159 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 ABCB1P08183 1280 aaPredicted RBP17.15■□□□□ 0.34
USP39-209ENST00000458268 RFPL3SP0C7P2 107 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 DHRS4L1P0CG22 281 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 GP1BBP13224 206 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 MANFP55145 182 aaKnown RBP17.15■□□□□ 0.34
USP39-209ENST00000458268 DCAF7P61962 342 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 FOXO1Q12778 655 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 PTGR1Q14914 329 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 CEBPEQ15744 281 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 C6orf136Q5SQH8 315 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 NPSR1Q6W5P4 371 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 C17orf47Q8NEP4 570 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 OR5M9Q8NGP3 310 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 OR6Y1Q8NGX8 325 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 ZFP28Q8NHY6 868 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 FBXO30Q8TB52 745 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 RELTQ969Z4 430 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 EFHD2Q96C19 240 aaPredicted RBP17.15■□□□□ 0.34
USP39-209ENST00000458268 FCRL1Q96LA6 429 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 NODALQ96S42 347 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 C20orf27Q9GZN8 174 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 SH2D2AQ9NP31 389 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 ZFP64Q9NPA5 681 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 B4GALT7Q9UBV7 327 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 RAP2CQ9Y3L5 183 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 COL12A1Q99715 3063 aa17.15■□□□□ 0.34
USP39-209ENST00000458268 UTP20O75691 2785 aaKnown RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 NPIPB8E9PQR5 432 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 ACOX3O15254 700 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 UGT2B11O75310 529 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 GLSO94925 669 aaPredicted RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 CLDN1O95832 211 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 DRD5P21918 477 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 GRK2P25098 689 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 MAN2A2P49641 1150 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 CDK9P50750 372 aaKnown RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 BST1Q10588 318 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 SLC10A1Q14973 349 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 ARHGAP11AQ6P4F7 1023 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 ANGPTL8Q6UXH0 198 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 BNC2Q6ZN30 1099 aaPredicted RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 RGS9BPQ6ZS82 235 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 PACS2Q86VP3 889 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 HOMEZQ8IX15 550 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 FAM57AQ8TBR7 257 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 NUDT8Q8WV74 236 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 CHMP6Q96FZ7 201 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 VSTM2LQ96N03 204 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 ADOQ96SZ5 270 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 OSBPL11Q9BXB4 747 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 SLC6A15Q9H2J7 730 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 PROK2Q9HC23 129 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 GALNT9Q9HCQ5 603 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 PNPOQ9NVS9 261 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 ALKBH4Q9NXW9 302 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 EIF3LQ9Y262 564 aaKnown RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 ZNF835Q9Y2P0 537 aa17.14■□□□□ 0.33
USP39-209ENST00000458268 GPR55Q9Y2T6 319 aaPredicted RBP17.14■□□□□ 0.33
USP39-209ENST00000458268 USP9YO00507 2555 aaPredicted RBP17.13■□□□□ 0.33
USP39-209ENST00000458268 LRRC3CA6NJW4 275 aa17.13■□□□□ 0.33
USP39-209ENST00000458268 SCAMP2O15127 329 aaKnown RBP17.13■□□□□ 0.33
USP39-209ENST00000458268 PLOD3O60568 738 aa17.13■□□□□ 0.33
USP39-209ENST00000458268 KITP10721 976 aa17.13■□□□□ 0.33
USP39-209ENST00000458268 CASP3P42574 277 aa17.13■□□□□ 0.33
USP39-209ENST00000458268 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms