RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CTHRC1Q96CG8 243 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 HCN3Q9P1Z3 774 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 BLOC1S6Q9UL45 172 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 USP34Q70CQ2 3546 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 H3BSA7 217 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SYT5O00445 386 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 ALPPP05187 535 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 H1F0P07305 194 aaKnown RBP16.55■□□□□ 0.24
LMNA-208ENST00000448611 CT62P0C5K7 136 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 CCDC159P0C7I6 412 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SLC35E2P0CK97 266 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 EEF1B2P24534 225 aaKnown RBP16.55■□□□□ 0.24
LMNA-208ENST00000448611 ELAVL4P26378 380 aaKnown RBP16.55■□□□□ 0.24
LMNA-208ENST00000448611 INAVAQ3KP66 663 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 ARHGAP11BQ3KRB8 267 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 ZNF311Q5JNZ3 666 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 MLIPQ5VWP3 458 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 LYSMD4Q5XG99 296 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 KCTD8Q6ZWB6 473 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 TAGAPQ8N103 731 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 AQP11Q8NBQ7 271 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 SGCDQ92629 289 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 FUZQ9BT04 418 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 PIGUQ9H490 435 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 ADAP2Q9NPF8 381 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 PCDHGA6Q9Y5G7 932 aa16.55■□□□□ 0.24
LMNA-208ENST00000448611 FITM1A5D6W6 292 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 GASTP01350 101 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 RNH1P13489 461 aaKnown RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 PIN1Q13526 163 aaPredicted RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 MAD2L1BPQ15013 274 aaPredicted RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 SEC23BQ15437 767 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 TCTE1Q5JU00 501 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 BROXQ5VW32 411 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 LAIR1Q6GTX8 287 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 Q6ZPB1 254 aaPredicted RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 PARP8Q8N3A8 854 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 AHCYL2Q96HN2 611 aaKnown RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 COL25A1Q9BXS0 654 aaPredicted RBP16.54■□□□□ 0.24
LMNA-208ENST00000448611 RBCK1Q9BYM8 510 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 ZNF556Q9HAH1 456 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 KLHL3Q9UH77 587 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 CHST2Q9Y4C5 530 aa16.54■□□□□ 0.24
LMNA-208ENST00000448611 ANGPTL1O95841 491 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 HTR1AP08908 422 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 TDGF1P13385 188 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 GGT2P36268 569 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 NUP107P57740 925 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 SMIM11AP58511 58 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 HPCAP84074 193 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 MAT1AQ00266 395 aaKnown RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 CFHR1Q03591 330 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 FOXD4Q12950 439 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 NPTX1Q15818 432 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ZBED5Q49AG3 693 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 FGD3Q5JSP0 725 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 TYW3Q6IPR3 259 aaKnown RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 ZCCHC12Q6PEW1 402 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 B3GNT8Q7Z7M8 397 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 VRK2Q86Y07 508 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 CARFQ8N187 725 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 PEX11GQ96HA9 241 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 TSC22D3Q99576 134 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ELF4Q99607 663 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 ARHGDIGQ99819 225 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 POLR1BQ9H9Y6 1135 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 PAK1IP1Q9NWT1 392 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 AASSQ9UDR5 926 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 TMCC3Q9ULS5 477 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 SCN2AQ99250 2005 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 A0A1W2PRQ8 180 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 FAAHO00519 579 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 HRO43593 1189 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ABCB7O75027 752 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 CPNE6O95741 557 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 OXSR1O95747 527 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 POU2F1P14859 743 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 GLB1P16278 677 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 PRKAR1BP31321 381 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 MAP3K8P41279 467 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 MAPK10P53779 464 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 CXCR4P61073 352 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ESRRGP62508 458 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 SRSF5Q13243 272 aaKnown RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 PMS2P3Q13401 168 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 DGCR6Q14129 220 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 NR1D2Q14995 579 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 EXOSC7Q15024 291 aaKnown RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 DCST1Q5T197 706 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 DHRS4L2Q6PKH6 230 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 WDR5BQ86VZ2 330 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ENTHD1Q8IYW4 607 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 CDRT4Q8N9R6 151 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 BPIFB6Q8NFQ5 453 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms