RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CEP70Q8NHQ1 597 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 FAM57AQ8TBR7 257 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 GFM2Q969S9 779 aaKnown RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 ELP4Q96EB1 424 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 ZNF764Q96H86 408 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 PKNOX2Q96KN3 472 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 VKORC1Q9BQB6 163 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 ANGPTL4Q9BY76 406 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 GLIPR2Q9H4G4 154 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 METTL7AQ9H8H3 244 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 ZDHHC11Q9H8X9 412 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 PLSCR2Q9NRY7 297 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 ATAD3AQ9NVI7 634 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 DDX18Q9NVP1 670 aaKnown RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 NKIRAS1Q9NYS0 192 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 COQ3Q9NZJ6 369 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 TINAGQ9UJW2 476 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 CNOT11Q9UKZ1 510 aaKnown RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 GPR55Q9Y2T6 319 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 OR10H1Q9Y4A9 318 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 PTGDR2Q9Y5Y4 395 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 CHCHD2Q9Y6H1 151 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 DIDO1Q9BTC0 2240 aaKnown RBP9.62□□□□□ -0.87
MCF2L-216ENST00000439475 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
MCF2L-216ENST00000439475 MYO18BQ8IUG5 2567 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 OR6C70A6NIJ9 312 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM233B4DJY2 109 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 NPIPA2E9PIF3 369 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 NPIPA3F8WFD2 350 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 AKAP10O43572 662 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 SUSD5O60279 629 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 LRATO95237 230 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 IGHG3P01860 377 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 DHRS4L1P0CG22 281 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TACR1P25103 407 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ELAVL4P26378 380 aaKnown RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 IL12BP29460 328 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 GCKP35557 465 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 HPCAL1P37235 193 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 CASP3P42574 277 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 CLK3P49761 638 aaKnown RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 SLC18A1P54219 525 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 PNLIPRP2P54317 469 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 HSF1Q00613 529 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 FOXO1Q12778 655 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ZNF155Q12901 538 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 SNTA1Q13424 505 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 NNATQ16517 81 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 SMU1Q2TAY7 513 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 C6orf136Q5SQH8 315 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 WLSQ5T9L3 541 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 IL23RQ5VWK5 629 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM81Q6P7N7 255 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM107Q6UX40 140 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 DOLPP1Q86YN1 238 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 OR7G2Q8NG99 324 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 OR1J4Q8NGS1 313 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 PHF10Q8WUB8 498 aaKnown RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 CCDC120Q96HB5 630 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM41AQ96HV5 264 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 AMDHD1Q96NU7 426 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 COL21A1Q96P44 957 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 BTBD9Q96Q07 612 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TP63Q9H3D4 680 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 FOLH1BQ9HBA9 442 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 TMBIM4Q9HC24 238 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 Q9N2J8 555 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ACKR4Q9NPB9 350 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ACSS1Q9NUB1 689 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ARGLU1Q9NWB6 273 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 KLRF1Q9NZS2 232 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 BAIAP2L1Q9UHR4 511 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 ACAD8Q9UKU7 415 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 C19orf53Q9UNZ5 99 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-216ENST00000439475 DTX4Q9Y2E6 619 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 MEMO1Q9Y316 297 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 HIVEP3Q5T1R4 2406 aa9.61□□□□□ -0.87
MCF2L-216ENST00000439475 A0A1B0GVC2 190 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 TMEM120BA0PK00 339 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 FIGNL2A6NMB9 653 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 AQP7O14520 342 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 ITM2AO43736 263 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 TRAPPC6AO75865 159 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 HOXD4P09016 255 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-216ENST00000439475 CT45A8P0DMV1 189 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 CT45A9P0DMV2 189 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 BCKDHAP12694 445 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 GABRA1P14867 456 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 AGAP20933 346 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 PRPS1L1P21108 318 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 BGNP21810 368 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 GDF1P27539 372 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 SOX18P35713 384 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 MC3RP41968 323 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 EMX2Q04743 252 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 HSPB3Q12988 150 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 DUSP8Q13202 625 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 ART3Q13508 389 aa9.6□□□□□ -0.87
MCF2L-216ENST00000439475 CASP8Q14790 479 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms