RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AP3D1O14617 1153 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 HAT1O14929 419 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SCAMP2O15127 329 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 ADAMDEC1O15204 470 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TIMM44O43615 452 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SMPD2O60906 423 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SH3BGRLO75368 114 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 KLF8O95600 359 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 GH1P01241 217 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 THY1P04216 161 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 IRF2P14316 349 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 EIF2S2P20042 333 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TCN2P20062 427 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MUTP22033 750 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MATR3P43243 847 aaKnown RBP eCLIP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 CDH13P55290 713 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 C21orf59P57076 290 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MGAT3Q09327 533 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TRAP1Q12931 704 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SRSF9Q13242 221 aaKnown RBP eCLIP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TMEM266Q2M3C6 531 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 PLEKHS1Q5SXH7 462 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 OR4A47Q6IF82 309 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MZT2BQ6NZ67 158 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 ISLR2Q6UXK2 745 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 C11orf42Q8N5U0 333 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 ALLCQ8N6M5 410 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 POC5Q8NA72 575 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 CSNK1G2-AS1Q8NCQ2 148 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 AGAP11Q8TF27 550 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TCEAL4Q96EI5 215 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM71F1Q96KD3 344 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SEPHS2Q99611 448 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC25A23Q9BV35 468 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MRPL9Q9BYD2 267 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 SYNCQ9H7C4 482 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 MRPL40Q9NQ50 206 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 TBC1D22BQ9NU19 505 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 NSMCE4AQ9NXX6 385 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 NLGN3Q9NZ94 848 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 IL17CQ9P0M4 197 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZNF581Q9P0T4 197 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 WDR83OSQ9Y284 106 aa2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 PTRH2Q9Y3E5 179 aaKnown RBP2.08□□□□□ -2.08
HMGB1P18-201ENST00000438801 IGHV3-20A0A0C4DH32 117 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 PRDM1O75626 825 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 TSPAN9O75954 239 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 PCCAP05165 728 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 INAFM2P0DMQ5 153 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 AADACP22760 399 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 CD82P27701 267 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 HOXA9P31269 272 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ASIPP42127 132 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ARRB1P49407 418 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 NDST2P52849 883 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 DCDC1P59894 354 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 RPL10AP62906 217 aaKnown RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 MC1RQ01726 317 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 PRKG2Q13237 762 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZNF235Q14590 738 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 CAVIN4Q5BKX8 364 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ATAD3CQ5T2N8 411 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 LELP1Q5T871 98 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 AGAP7PQ5VUJ5 663 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZFAND6Q6FIF0 208 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 PRR27Q6MZM9 219 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 C1orf122Q6ZSJ8 110 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZC3H3Q8IXZ2 948 aaKnown RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 C4orf32Q8N8J7 132 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 CHURC1Q8WUH1 139 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 METTL21AQ8WXB1 218 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 SEPT1Q8WYJ6 367 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 PIK3R3Q92569 461 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 MRPL24Q96A35 216 aaKnown RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 KIAA1143Q96AT1 154 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 SPACA9Q96E40 222 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 MGME1Q9BQP7 344 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCDC28BQ9BUN5 200 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 GPR174Q9BXC1 333 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 SYNDIG1Q9H7V2 258 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 Q9H8V8 135 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 GPN2Q9H9Y4 310 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 RAVER2Q9HCJ3 691 aaKnown RBP2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 MYNNQ9NPC7 610 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC35C2Q9NQQ7 365 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 RGS18Q9NS28 235 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 MIS18AQ9NYP9 233 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 ABCD2Q9UBJ2 740 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 NTNG1Q9Y2I2 539 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 CR1P17927 2039 aa2.07□□□□□ -2.08
HMGB1P18-201ENST00000438801 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 A0A1W2PQ09 198 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM220BPB1ANY3 271 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCER2I3L3R5 266 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 M0QZ92 97 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC1A7O00341 560 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 E2F3O00716 465 aa2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 IPO8O15397 1037 aaKnown RBP2.06□□□□□ -2.08
HMGB1P18-201ENST00000438801 YKT6O15498 198 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms