RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 ROPN1Q9HAT0 212 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 MYNNQ9NPC7 610 aa20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 TAS2R7Q9NYW3 318 aa20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 LGALS13Q9UHV8 139 aa20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 EXO1Q9UQ84 846 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 APCP25054 2843 aa20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 PCNX3Q9H6A9 2034 aa20.26■□□□□ 0.83
SEMA3B-205ENST00000434030 MYO1GB0I1T2 1018 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 AZIN1O14977 448 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 PLOD3O60568 738 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 UGT2B11O75310 529 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 CT45A8P0DMV1 189 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 CT45A9P0DMV2 189 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 GLI4P10075 376 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 PRPH2P23942 346 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 IFFO1Q0D2I5 559 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 ERCC6LQ2NKX8 1250 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 CT45A2Q5DJT8 189 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 B3GNT6Q6ZMB0 384 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 SRRM1Q8IYB3 904 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 FAM9CQ8IZT9 166 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 OR7G2Q8NG99 324 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 METTL2AQ96IZ6 378 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 BTBD9Q96Q07 612 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 ALKBH4Q9NXW9 302 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 WBP11Q9Y2W2 641 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 PTGDR2Q9Y5Y4 395 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 MED12Q93074 2177 aa20.25■□□□□ 0.83
SEMA3B-205ENST00000434030 NPIPB8E9PQR5 432 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 SLC28A1O00337 649 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 GNB5O14775 395 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 ICOSLGO75144 302 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 SEC22BO75396 215 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 TRAPPC6AO75865 159 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 SLU7O95391 586 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 HPNP05981 417 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 GABRA1P14867 456 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 ALDH3A1P30838 453 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 PTGDSP41222 190 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 CDK9P50750 372 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 TIGD3Q6B0B8 471 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 SLC30A6Q6NXT4 461 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 WDR93Q6P2C0 686 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 EMBQ6PCB8 327 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 Q6ZSR9 355 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 OR10Q1Q8NGQ4 319 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 TMBIM1Q969X1 311 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 EGLN2Q96KS0 407 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 VSTM2LQ96N03 204 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 FAM111AQ96PZ2 611 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 TRMOQ9BU70 441 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 UCK2Q9BZX2 261 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 ENKD1Q9H0I2 346 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 FOLH1BQ9HBA9 442 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 MIEF1Q9NQG6 463 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 SLC17A7Q9P2U7 560 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 C15orf41Q9Y2V0 281 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 FIS1Q9Y3D6 152 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 PCDHGB3Q9Y5G1 929 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 ADGRG4Q8IZF6 3080 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 CREBBPQ92793 2442 aa20.24■□□□□ 0.83
SEMA3B-205ENST00000434030 KIAA1549Q9HCM3 1950 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 LRBAP50851 2863 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 C2orf72A6NCS6 295 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 SPAG7O75391 227 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 ERN1O75460 977 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 REM1O75628 298 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 JUNP05412 331 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 HOXD4P09016 255 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 CORO7P57737 925 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 SNTA1Q13424 505 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 C1orf185Q5T7R7 199 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 DCHS2Q6V1P9 2916 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 RNF165Q6ZSG1 346 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 GDF7Q7Z4P5 450 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 ZNF295-AS1Q8N0V1 137 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 ACBD4Q8NC06 268 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 OR1J4Q8NGS1 313 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 CAVIN3Q969G5 261 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 SPOCK3Q9BQ16 436 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 MECRQ9BV79 373 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 TRIM8Q9BZR9 551 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 STMN4Q9H169 189 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 TUBB1Q9H4B7 451 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 GALNT9Q9HCQ5 603 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 C1orf109Q9NX04 203 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 TAS2R9Q9NYW1 312 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 SENP1Q9P0U3 644 aa20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 V9GYY5 206 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-205ENST00000434030 C15orf38-AP3S2A0A0A6YYH1 394 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 NKX2-6A6NCS4 301 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 OR6C70A6NIJ9 312 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 FAM90A27PA6NNH2 459 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 RGS14O43566 566 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 TACR1P25103 407 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 ELAVL4P26378 380 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 PTPN6P29350 595 aa20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 NCBP2P52298 156 aaKnown RBP eCLIP20.22■□□□□ 0.83
SEMA3B-205ENST00000434030 TFF3Q07654 80 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms