RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ZNF419Q96HQ0 510 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PKMYT1Q99640 499 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 UCK2Q9BZX2 261 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 EGLN1Q9GZT9 426 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 CHST8Q9H2A9 424 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TCF7L1Q9HCS4 588 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MRPL39Q9NYK5 338 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 GPRC5BQ9NZH0 403 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PDP1Q9P0J1 537 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 SALL4Q9UJQ4 1053 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 HTRA2O43464 458 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 OPN1LWP04000 364 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 F7P08709 466 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TIA1P31483 386 aaKnown RBP eCLIP6.83□□□□□ -1.323e-7■■■■□ 24.4
CNOT4-206ENST00000428680 GPR85P60893 370 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ALG10Q5BKT4 473 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ADAMTSL4Q6UY14 1074 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 HIPK1Q86Z02 1210 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 BPIFB6Q8NFQ5 453 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TRMT61AQ96FX7 289 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PEBP4Q96S96 227 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 DCUN1D5Q9BTE7 237 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PDCD10Q9BUL8 212 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 KCNJ16Q9NPI9 418 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 STOX2Q9P2F5 926 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 WBP11Q9Y2W2 641 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF451Q9Y4E5 1061 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 AP4B1Q9Y6B7 739 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ARID1BQ8NFD5 2236 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 A0A1W2PPM1 405 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 FAM189A1O60320 539 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 FMO6PO60774 539 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 CERS1P27544 350 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 FMO3P31513 532 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MC3RP41968 323 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 EFNA3P52797 238 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PRDX1Q06830 199 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM44Q2T9K0 475 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 NDUFAF5Q5TEU4 345 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 KCTD18Q6PI47 426 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 SLC2A7Q6PXP3 512 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 OR8H2Q8N162 312 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 CDRT4Q8N9R6 151 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF610Q8N9Z0 462 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 CAVIN3Q969G5 261 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TRIB3Q96RU7 358 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MRPS26Q9BYN8 205 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ACTR6Q9GZN1 396 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 STOML2Q9UJZ1 356 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 LOC105369274A0A096LPK9 316 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TEX51A0A1B0GUA7 166 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PNMA8CA0A1B0GUJ8 204 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 DNAJA2O60884 412 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM63AO94886 807 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 SEMA3DO95025 777 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TGDSO95455 350 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 SPARCP09486 303 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 H2BFMP0C1H6 154 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 FTH1P19P0C7X4 201 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 XRCC1P18887 633 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PTPN4P29074 926 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MMP12P39900 470 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 GPR3P46089 330 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 SLC6A8P48029 635 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ARF5P84085 180 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MAT1AQ00266 395 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TMED1Q13445 227 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM52BQ4KMG9 183 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PIGWQ7Z7B1 504 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 FAM217AQ8IXS0 508 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PLPP6Q8IY26 295 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 OR4N4Q8N0Y3 316 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ENDOVQ8N8Q3 282 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 OR11G2Q8NGC1 345 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 OR5L1Q8NGL2 311 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 C1GALT1C1Q96EU7 318 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 WDR83Q9BRX9 315 aaKnown RBP6.83□□□□□ -1.32
CNOT4-206ENST00000428680 KCNF1Q9H3M0 494 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TPT1P8Q9HAU6 139 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TMEM138Q9NPI0 162 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 ZNF226Q9NYT6 803 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 TAS2R10Q9NYW0 307 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PILRBQ9UKJ0 227 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 PACSIN3Q9UKS6 424 aa6.83□□□□□ -1.32
CNOT4-206ENST00000428680 MYH11P35749 1972 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 TRBC2A0A5B9 178 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 DAPL1A0PJW8 107 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 A8MT66 165 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 IDSB3KWA1 339 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 HRO43593 1189 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PRICKLE3O43900 615 aaPredicted RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 RPP14O95059 124 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 LCATP04180 440 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 H1F0P07305 194 aaKnown RBP6.82□□□□□ -1.32
CNOT4-206ENST00000428680 PRSS56P0CW18 603 aa6.82□□□□□ -1.32
CNOT4-206ENST00000428680 FECHP22830 423 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms