RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PRPS2P11908 318 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 BCKDHAP12694 445 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ARRB2P32121 409 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 PTGS2P35354 604 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 MC3RP41968 323 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 MASP1P48740 699 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 EMDP50402 254 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SLC18A1P54219 525 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 MANFP55145 182 aaKnown RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 MRPS22P82650 360 aaKnown RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 HSF1Q00613 529 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 DUSP8Q13202 625 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 MPP2Q14168 576 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ZNHIT3Q15649 155 aaPredicted RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 C3AR1Q16581 482 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 CMPK2Q5EBM0 449 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 TMEM107Q6UX40 140 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 NUP54Q7Z3B4 507 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 TRIM42Q8IWZ5 723 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 PRR22Q8IZ63 422 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SLC34A3Q8N130 599 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 LIX1Q8N485 282 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ZNF781Q8N8C0 355 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 OR7G2Q8NG99 324 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 OR52N2Q8NGI0 321 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SPPL2AQ8TCT8 520 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 MGARPQ8TDB4 240 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 TMCO6Q96DC7 493 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 OMA1Q96E52 524 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ZNF597Q96LX8 424 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 AMDHD1Q96NU7 426 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 BTBD9Q96Q07 612 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 PRPF18Q99633 342 aaKnown RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 C1orf50Q9BV19 199 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 LDAHQ9H6V9 325 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 EXO5Q9H790 373 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 METTL7AQ9H8H3 244 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 FOLH1BQ9HBA9 442 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ZFP64Q9NPA5 681 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 BAIAP2L1Q9UHR4 511 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 CNOT11Q9UKZ1 510 aaKnown RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 C19orf53Q9UNZ5 99 aaPredicted RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SPENQ96T58 3664 aaKnown RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 WIPF3A6NGB9 483 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 PLOD2O00469 737 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 SCAMP2O15127 329 aaKnown RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 TO15178 435 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 REM1O75628 298 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 PDE9AO76083 593 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 GLSO94925 669 aaPredicted RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 TPOP07202 933 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ABCB1P08183 1280 aaPredicted RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 IFI6P09912 130 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 IL12BP29460 328 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 MAGEA5P43359 124 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 FOXO1Q12778 655 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 HSPB3Q12988 150 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 HYAL4Q2M3T9 481 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 C6orf136Q5SQH8 315 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 IL23RQ5VWK5 629 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ATG16L1Q676U5 607 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ANKRD26P1Q6NSI1 321 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 SLC44A2Q8IWA5 706 aaPredicted RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 TMEM251Q8N6I4 163 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 SIMC1Q8NDZ2 872 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 TLCD1Q96CP7 247 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 C3orf30Q96M34 536 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 VSTM2LQ96N03 204 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 RILPQ96NA2 401 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 COL21A1Q96P44 957 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ANKRA2Q9H9E1 313 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 C3orf14Q9HBI5 128 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 ACSS1Q9NUB1 689 aaPredicted RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 ATAD3AQ9NVI7 634 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 KLRF1Q9NZS2 232 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 GIMAP2Q9UG22 337 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 TINAGQ9UJW2 476 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 MRTO4Q9UKD2 239 aaKnown RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 MAPRE3Q9UPY8 281 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 EXO1Q9UQ84 846 aaKnown RBP10.05□□□□□ -0.8
USP49-204ENST00000423567 ZNF835Q9Y2P0 537 aa10.05□□□□□ -0.8
USP49-204ENST00000423567 POLEQ07864 2286 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 OR6C70A6NIJ9 312 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 TTC36A6NLP5 189 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 WISP2O76076 250 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 GP1BBP13224 206 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 PRPS1L1P21108 318 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 GDF1P27539 372 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms