RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NDUFV2P19404 249 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 LSSP48449 732 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CDKN2DP55273 166 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CHPT1Q8WUD6 406 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 C22orf15Q8WYQ4 148 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 HLA-CQ95604 372 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MYRFLQ96LU7 910 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 B3GNT2Q9NY97 397 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 C17orf105B2RV13 164 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SGK494L7N484 410 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 YES1P07947 543 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CD1DP15813 335 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 RPA4Q13156 261 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 TMEM53Q6P2H8 277 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 OR8J3Q8NGG0 315 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 RHEBL1Q8TAI7 183 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ACTRT3Q9BYD9 372 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 VDAC3Q9Y277 283 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 SCAMP2O15127 329 aaKnown RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 AKR1C4P17516 323 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CD53P19397 219 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 NPR2P20594 1047 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 GPX6P59796 221 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 EEF1A1P68104 462 aaKnown RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 TIFABQ6ZNK6 161 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 SLC39A1Q9NY26 324 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 A0A0A6YYH2 397 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 A0A0G2JMP0 313 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 A6NJ64 397 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ELK4P28324 431 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ERVK-16P61578 105 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ATG9BQ674R7 924 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 OR4M2Q8NGB6 313 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ZFYVE21Q9BQ24 234 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 GDE1Q9NZC3 331 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 KCPQ6ZWJ8 1503 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 TAP2Q03519 686 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 COMTD1Q86VU5 262 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ATOH1Q92858 354 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CREB3L1Q96BA8 519 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 SERINC2Q96SA4 455 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ULBP3Q9BZM4 244 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 EEF1E1O43324 174 aaKnown RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PHC1P78364 1004 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 MZT1Q08AG7 82 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ESCO2Q56NI9 601 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 BORAQ6PGQ7 559 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 UNC5DQ6UXZ4 953 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 SLC16A9Q7RTY1 509 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CHST14Q8NCH0 376 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CIDECQ96AQ7 238 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-205ENST00000418258 APOOQ9BUR5 198 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 LINC00597Q9H2U6 94 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PISDQ9UG56 409 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PTGDR2Q9Y5Y4 395 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PSAT1Q9Y617 370 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ANKRD34BA5PLL1 514 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 IL32P24001 234 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CD97P48960 835 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF33BQ06732 778 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 MTFR2Q6P444 385 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 KLBQ86Z14 1044 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 OR9A4Q8NGU2 314 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ALOXE3Q9BYJ1 711 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ACSL6Q9UKU0 697 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 CLCA1A8K7I4 914 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 FMO6PO60774 539 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 DIO3P55073 304 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 RAB33AQ14088 237 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 MANEAQ5SRI9 462 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PSAPL1Q6NUJ1 521 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 VHLLQ6RSH7 139 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 ACVR1CQ8NER5 493 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PEX13Q92968 403 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 PCYT2Q99447 389 aa10.66□□□□□ -0.7
PTCH1-205ENST00000418258 SLC22A31A6NKX4 558 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 PHYHO14832 338 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 MT-ND2P03891 347 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 BMP4P12644 408 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 POU3F2P20265 443 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-205ENST00000418258 GDF1P27539 372 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 EMP2P54851 167 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 CHRNEQ04844 493 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 ARL14Q8N4G2 192 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 OR52N2Q8NGI0 321 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 OR51T1Q8NGJ9 327 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 SUN5Q8TC36 379 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 GLYATL2Q8WU03 294 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 ENKD1Q9H0I2 346 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 MEPEQ9NQ76 525 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-205ENST00000418258 NFAT5O94916 1531 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 MDFIC2A0A1B0GVS7 189 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 AGAP5A6NIR3 686 aa10.65□□□□□ -0.7
PTCH1-205ENST00000418258 SLC1A7O00341 560 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms