RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SFRP5Q5T4F7 317 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 MON1AQ86VX9 555 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 RBM45Q8IUH3 476 aaKnown RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 GIMAP5Q96F15 307 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 NPAS1Q99742 590 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 COPZ2Q9P299 210 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 LIMS1P48059 325 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 GPR17Q13304 367 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 SPIN4Q56A73 249 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 XKR6Q5GH73 641 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 RETSATQ6NUM9 610 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 WASH2PQ6VEQ5 465 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 CIDECQ96AQ7 238 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF582Q96NG8 517 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF436Q9C0F3 470 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 PTTG3PQ9NZH4 202 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 IL17CQ9P0M4 197 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 PTGFRNQ9P2B2 879 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF282Q9UDV7 671 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 KRBOX1C9JBD0 128 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 L7N2F9 121 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 IFNA14P01570 189 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 MT-ND4P03905 459 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR12D1P0DN82 309 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 IRS1P35568 1242 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 RPS26P62854 115 aaKnown RBP13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF770Q6IQ21 691 aaPredicted RBP13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 ACSM5Q6NUN0 579 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 NLRC3Q7RTR2 1065 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 LMNTD1Q8N9Z9 388 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 HHIPQ96QV1 700 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 MRPL15Q9P015 296 aaKnown RBP13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 CYB5R1Q9UHQ9 305 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 RUVBL1Q9Y265 456 aaKnown RBP13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 IGLV3-10A0A075B6K4 115 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 A0A1B0GVI7 797 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 STK25O00506 426 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 GMDSO60547 372 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC19A2O60779 497 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 PTP4A3O75365 173 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 HPXP02790 462 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 H2AFB2P0C5Z0 115 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 GJA1P17302 382 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 AHCYP23526 432 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 ATP6V1E1P36543 226 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 HNMTP50135 292 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 TPBGQ13641 420 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC5A12Q1EHB4 618 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZNF385BQ569K4 471 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 TMEM201Q5SNT2 666 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 ABHD1Q96SE0 405 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 RC3H2Q9HBD1 1191 aaKnown RBP13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 KIF25Q9UIL4 384 aa13.89□□□□□ -0.19
NCKIPSD-204ENST00000416649 KCNE1BA0A087WTH5 132 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 MEIKINA0A087WXM9 373 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 A8MVJ9 347 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 F5H5T6 163 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 CSKP41240 450 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 HMGA2P52926 109 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 MC1RQ01726 317 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 PUM1Q14671 1186 aaKnown RBP eCLIP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 C12orf73Q69YU5 71 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 NPAS4Q8IUM7 802 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 PLA2G15Q8NCC3 412 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 UBTD2Q8WUN7 234 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 HGDQ93099 445 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 WBP1Q96G27 269 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC38A2Q96QD8 506 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 GKN1Q9NS71 199 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 MGAT4BQ9UQ53 548 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 NUBP2Q9Y5Y2 271 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRR23D1E9PI22 279 aaPredicted RBP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 INPPL1O15357 1258 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 NME6O75414 186 aaPredicted RBP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 SIX6O95475 246 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 VNN2O95498 520 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 ETHE1O95571 254 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 HLA-DPB1P04440 258 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRR23D2P0DMB1 279 aaPredicted RBP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 TACR2P21452 398 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 PITPNBP48739 271 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 MVDP53602 400 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 IKZF1Q13422 519 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 TSTA3Q13630 321 aaPredicted RBP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 GPRC6AQ5T6X5 926 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 ANXA8L1Q5VT79 327 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 RNF165Q6ZSG1 346 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 SIAH3Q8IW03 269 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 OSGEPL1Q9H4B0 414 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 POMT2Q9UKY4 750 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms