RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 VPS26BQ4G0F5 336 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 MFSD4BQ5TF39 518 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 C18orf63Q68DL7 685 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 FAM71E1Q6IPT2 247 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 BLOC1S3Q6QNY0 202 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 UNQ6494/PRO21346Q6UXR6 183 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 IGFN1Q86VF2 1251 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 PLPP5Q8NEB5 264 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 HDAC2Q92769 488 aaKnown RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 ZNF764Q96H86 408 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 TSSK3Q96PN8 268 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 IL1RL2Q9HB29 575 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 MIEF1Q9NQG6 463 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 PRTFDC1Q9NRG1 225 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 AIG1Q9NVV5 245 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 C3orf18Q9UK00 162 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 MKL2Q9ULH7 1088 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CORINQ9Y5Q5 1042 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 A0A1W2PP18 115 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 IDSB3KWA1 339 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 J3QRK9 145 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 JRKO75564 520 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CDC123O75794 336 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 RECKO95980 971 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 HEXBP07686 556 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 PRPS1L1P21108 318 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 ALDH3A2P51648 485 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 EMP2P54851 167 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 DIO3P55073 304 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 C21orf58P58505 322 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 C2orf80Q0P641 193 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SLC13A2Q13183 592 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 BIKQ13323 160 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 TOP3AQ13472 1001 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 ERV3-1Q14264 604 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 FXNQ16595 210 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 GTF2IRD2BQ6EKJ0 949 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SLC48A1Q6P1K1 146 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 R3HCC1LQ7Z5L2 792 aaKnown RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 GTF2IRD2Q86UP8 949 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SAMD14Q8IZD0 417 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 CDC26Q8NHZ8 85 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 TAMM41Q96BW9 452 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 MTERF3Q96E29 417 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SLX1AQ9BQ83 275 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 BRINP2Q9C0B6 783 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 VN1R1Q9GZP7 353 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 ING2Q9H160 280 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 ACTL8Q9H568 366 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SEC16AO15027 2179 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CACNA1AO00555 2505 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 RRP8O43159 456 aaKnown RBP13.58□□□□□ -0.24
SGCE-202ENST00000415788 LIFP15018 202 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 F8A1P23610 371 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 HPCAL1P37235 193 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 EIF2B2P49770 351 aaKnown RBP13.58□□□□□ -0.24
SGCE-202ENST00000415788 CLDN8P56748 225 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 RHAGQ02094 409 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 SERTAD2Q14140 314 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 SSPNQ14714 243 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 TTC23Q5W5X9 447 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 XAF1Q6GPH4 301 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 THAP5Q7Z6K1 395 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 LAPTM4BQ86VI4 370 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 PRSS58Q8IYP2 241 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 TMCO5AQ8N6Q1 288 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 DNAJB14Q8TBM8 379 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 METTL21AQ8WXB1 218 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
SGCE-202ENST00000415788 EGLN2Q96KS0 407 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 REEP4Q9H6H4 257 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 SLC52A3Q9NQ40 469 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 DAPK2Q9UIK4 370 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 GPR45Q9Y5Y3 372 aa13.58□□□□□ -0.24
SGCE-202ENST00000415788 IGKV3D-11A0A0A0MRZ8 115 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 TBX19O60806 448 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 DEAF1O75398 565 aaPredicted RBP13.57□□□□□ -0.24
SGCE-202ENST00000415788 MMP11P24347 488 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
SGCE-202ENST00000415788 ALDH9A1P49189 494 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 HNRNPFP52597 415 aaKnown RBP13.57□□□□□ -0.24
SGCE-202ENST00000415788 KCNK10P57789 538 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 MC1RQ01726 317 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 LIPEQ05469 1076 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 STX4Q12846 297 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 NFYCQ13952 458 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 DAG1Q14118 895 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
SGCE-202ENST00000415788 PTGR1Q14914 329 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 SHISA6Q6ZSJ9 500 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 SHISA5Q8N114 240 aa13.57□□□□□ -0.24
SGCE-202ENST00000415788 TMEM52Q8NDY8 209 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms