RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 ALOXE3Q9BYJ1 711 aa13.73□□□□□ -0.21
RBBP4-204ENST00000414241 FGF21Q9NSA1 209 aa13.73□□□□□ -0.21
RBBP4-204ENST00000414241 SLC13A4Q9UKG4 626 aa13.73□□□□□ -0.21
RBBP4-204ENST00000414241 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
RBBP4-204ENST00000414241 NUP214P35658 2090 aaPredicted RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 SYNDIG1LA6NDD5 238 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 A8MU76 341 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 H3BNH8 94 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 DSCR3O14972 297 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 GADD45GO95257 159 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 RECKO95980 971 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 GNAO1P09471 354 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 PABPC4LP0CB38 370 aaKnown RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 SP9P0CG40 484 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 ACP2P11117 423 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 CKMT1AP12532 417 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 ALAS2P22557 587 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 MAP3K8P41279 467 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 DAPP51397 102 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 CDH12P55289 794 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 CHRNEQ04844 493 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 DSG2Q14126 1118 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 DUSP5Q16690 384 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 DHRS4L2Q6PKH6 230 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 PHF10Q8WUB8 498 aaKnown RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 CDS1Q92903 461 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 ZNF501Q96CX3 271 aaPredicted RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 OTUB1Q96FW1 271 aaPredicted RBP13.72□□□□□ -0.21
RBBP4-204ENST00000414241 LOXL4Q96JB6 756 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 FSCN3Q9NQT6 498 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 KLHL28Q9NXS3 571 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
RBBP4-204ENST00000414241 EIF4E1BA6NMX2 242 aaKnown RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 STX11O75558 287 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 RPLP0P05388 317 aaKnown RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 LIMS1P48059 325 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 KCNAB2Q13303 367 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 CYP27C1Q4G0S4 372 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 KCTD21Q4G0X4 260 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 MLIPQ5VWP3 458 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 TCTN3Q6NUS6 607 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 ARHGAP22Q7Z5H3 698 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 PEX5LQ8IYB4 626 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 FBXL20Q96IG2 436 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 MRPS26Q9BYN8 205 aaKnown RBP13.71□□□□□ -0.21
RBBP4-204ENST00000414241 ZNF304Q9HCX3 659 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 KRT84Q9NSB2 600 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 ACAD8Q9UKU7 415 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
RBBP4-204ENST00000414241 LOC100130705A0A1B0GUX0 176 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 A0A1B0GX78 115 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 CCNB2O95067 398 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 NKX2-2O95096 273 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 CBX7O95931 251 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 THBS1P07996 1170 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 CT62P0C5K7 136 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 S1PR1P21453 382 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 YAP1P46937 504 aaKnown RBP13.71□□□□□ -0.22
RBBP4-204ENST00000414241 CCL7P80098 99 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 PERM1Q5SV97 790 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 ZNF574Q6ZN55 896 aaPredicted RBP13.71□□□□□ -0.22
RBBP4-204ENST00000414241 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 COX18Q8N8Q8 333 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 SETD9Q8NE22 299 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 OR10G2Q8NGC3 310 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 OR52R1Q8NGF1 315 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 OR52P1PQ8NH57 321 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 MUS81Q96NY9 551 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 SDF2Q99470 211 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.22
RBBP4-204ENST00000414241 RBCK1Q9BYM8 510 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 ZNF350Q9GZX5 532 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 SAP130Q9H0E3 1048 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 ZNF556Q9HAH1 456 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 ENOPH1Q9UHY7 261 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 TMCC3Q9ULS5 477 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 HCN4Q9Y3Q4 1203 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 TMEM184BQ9Y519 407 aaPredicted RBP13.71□□□□□ -0.22
RBBP4-204ENST00000414241 HSPE1-MOB4S4R3N1 261 aa13.71□□□□□ -0.22
RBBP4-204ENST00000414241 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
RBBP4-204ENST00000414241 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
RBBP4-204ENST00000414241 A0A1W2PQM1 296 aa13.7□□□□□ -0.22
RBBP4-204ENST00000414241 SMNDC1O75940 238 aaKnown RBP eCLIP13.7□□□□□ -0.228e-9■■■■■ 38.1
RBBP4-204ENST00000414241 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
RBBP4-204ENST00000414241 IFNA8P32881 189 aa13.7□□□□□ -0.22
RBBP4-204ENST00000414241 PDX1P52945 283 aa13.7□□□□□ -0.22
RBBP4-204ENST00000414241 TPD52P55327 224 aaPredicted RBP13.7□□□□□ -0.22
RBBP4-204ENST00000414241 DAB2P98082 770 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms