RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SHARPINQ9H0F6 387 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CSTL1Q9H114 145 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 POLR3FQ9H1D9 316 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 EGLN3Q9H6Z9 239 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 FKRPQ9H9S5 495 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 EBF2Q9HAK2 575 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 IL1RL2Q9HB29 575 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 AGPAT3Q9NRZ7 376 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SMOXQ9NWM0 555 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 PDP1Q9P0J1 537 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-204ENST00000412061 POLKQ9UBT6 870 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 FBXL4Q9UKA2 621 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 ADAM28Q9UKQ2 775 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 FZR1Q9UM11 496 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 SLC6A5Q9Y345 797 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 CCDC7Q96M83 1385 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 NINLQ9Y2I6 1382 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 KIF27Q86VH2 1401 aa3.99□□□□□ -1.77
BRCA1-204ENST00000412061 IGHV4OR15-8A0A075B7B6 117 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LOC101059948A0A1B0GTJ6 334 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 TTC26A0AVF1 554 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ACOD1A6NK06 481 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LSM1O15116 133 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 INSIG1O15503 277 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NMT2O60551 498 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 TRIM3O75382 744 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 UPK3AO75631 287 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NXPH2O95156 264 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ZBTB11O95625 1053 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NTN1O95631 604 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LYNP07948 512 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 SLC35G4P0C7Q5 338 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 T-ENOLP0DO92 83 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 IGHV4-31P0DP07 118 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 SNHG28P0DPA3 235 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ERVK-10P10266 1014 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 MBL2P11226 248 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CDH1P12830 882 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CPN2P22792 545 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 UCP1P25874 307 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CHMLP26374 656 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ATP5C1P36542 298 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LONP1P36776 959 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 EPS15P42566 896 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 THBS3P49746 956 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ART1P52961 327 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RAG2P55895 527 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 C21orf59P57076 290 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 OSTNP61366 133 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 BTG1P62324 171 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RPS15P62841 145 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 MRPS6P82932 125 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 MERTKQ12866 999 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 C3AR1Q16581 482 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 KRT71Q3SY84 523 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RAET1LQ5VY80 246 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 OR2A2Q6IF42 318 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RNASEKQ6P5S7 137 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 UNQ6126/PRO20091Q6UXV3 157 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 EIF3MQ7L2H7 374 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CENPQQ7L2Z9 268 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ACOT1Q86TX2 421 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CACUL1Q86Y37 369 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 PLD3Q8IV08 490 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LINC00518Q8N0U6 118 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CENPSQ8N2Z9 138 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 OR1L4Q8NGR5 311 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 OR13C3Q8NGS6 347 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 LNX1Q8TBB1 728 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RDH11Q8TC12 318 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 TMIGD2Q96BF3 282 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NSL1Q96IY1 281 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ATP6V1G3Q96LB4 118 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 DOCK7Q96N67 2140 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 AMDHD1Q96NU7 426 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RIT2Q99578 217 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 GAL3ST1Q99999 423 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 AUNIPQ9H7T9 357 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 GEMIN7Q9H840 131 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ANKRA2Q9H9E1 313 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 CYP3A43Q9HB55 503 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 MCCC2Q9HCC0 563 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 S100A14Q9HCY8 104 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 POLE4Q9NR33 117 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NLGN3Q9NZ94 848 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 GNG12Q9UBI6 72 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ERRFI1Q9UJM3 462 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 RALYQ9UKM9 306 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 NOSIPQ9Y314 301 aaKnown RBP3.98□□□□□ -1.77
BRCA1-204ENST00000412061 SMCHD1A6NHR9 2005 aa3.98□□□□□ -1.77
BRCA1-204ENST00000412061 ESYT2A0FGR8 921 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 SHISA7A6NL88 538 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 SNURFLB1AK76 121 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GOLGA8TH3BQL2 631 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 BTN3A3O00478 584 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CCSO14618 274 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 IMPA2O14732 288 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 STX7O15400 261 aaKnown RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 NBR2O15453 112 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms