RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ACOX3O15254 700 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TNFSF13O75888 250 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KLHL2O95198 593 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CSNK2A2P19784 350 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DRD5P21918 477 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 STX2P32856 288 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MAGEA4P43358 317 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PPICP45877 212 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 LHX2P50458 406 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCNG1P51959 295 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MAPK12P53778 367 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM27E3Q08E93 113 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SGO1Q5FBB7 561 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MROH9Q5TGP6 573 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FRG2Q64ET8 278 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KLC3Q6P597 504 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCDC91Q7Z6B0 441 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PRIMA1Q86XR5 153 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PLCZ1Q86YW0 608 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GRAMD2AQ8IUY3 354 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OR52B6Q8NGF0 335 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 Q96MF0 132 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FRG2BQ96QU4 278 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MDFIQ99750 246 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ZNF639Q9UID6 485 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PLLPQ9Y342 182 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ARID1AO14497 2285 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 A0A1W2PNV4 684 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KIAA1324LA8MWY0 1029 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MSTNO14793 375 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SIAH2O43255 324 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 REM1O75628 298 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CBX7O95931 251 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TGM6O95932 706 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ATP1B1P05026 303 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TCEA1P23193 301 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PCSK6P29122 969 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SRD5A2P31213 254 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PLTPP55058 493 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CLDN18P56856 261 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 HMGCS1Q01581 520 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 NAB1Q13506 487 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TRMT12Q53H54 448 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 METTL2BQ6P1Q9 378 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 P4HA3Q7Z4N8 544 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 METTL4Q8N3J2 472 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TRPC4APQ8TEL6 797 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PIK3IP1Q96FE7 263 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SFXN2Q96NB2 322 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GPR78Q96P69 363 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KCNF1Q9H3M0 494 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 UBTD1Q9HAC8 227 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FBXL2Q9UKC9 423 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DLGAP4Q9Y2H0 992 aa12.91□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DSCAMO60469 2012 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 HEATR5AQ86XA9 2040 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 A0A096LPK6 155 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 HMX2A2RU54 273 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DEFB108AA8MXU0 73 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 RAD51CO43502 376 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ZNF708P17019 499 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FPR1P21462 350 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CD79BP40259 229 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MC3RP41968 323 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EMDP50402 254 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DUSP2Q05923 314 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 IFT88Q13099 833 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ACKR1Q16570 336 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OR5M10Q6IEU7 315 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM180BQ6P0A1 224 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PRSS57Q6UWY2 283 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CHMP1BQ7LBR1 199 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 COMMD6Q7Z4G1 85 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PTGR2Q8N8N7 351 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CNEP1R1Q8N9A8 125 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TMBIM1Q969X1 311 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TM4SF18Q96CE8 201 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KLHL29Q96CT2 875 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PHF21BQ96EK2 531 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCL19Q99731 98 aa12.9□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms