RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 REC8O95072 547 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 IGLV3-19P01714 112 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 MMP1P03956 469 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 RPN1P04843 607 aaKnown RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 PCCAP05165 728 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 CHRNGP07510 517 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 RETP07949 1114 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 HOXB7P09629 217 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF14P17017 642 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 CCND3P30281 292 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 MAT2AP31153 395 aaKnown RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLC26A2P50443 739 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 AKAP17AQ02040 695 aaKnown RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLC3A1Q07837 685 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 KLF5Q13887 457 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ELAVL3Q14576 367 aaKnown RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 C16orf72Q14CZ0 275 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZKSCAN8Q15776 578 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 CDO1Q16878 200 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 KRTAP13-2Q52LG2 175 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 FRA10AC1Q70Z53 315 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 SPATA19Q7Z5L4 167 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 GPR142Q7Z601 462 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLFN11Q7Z7L1 901 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 SAXO1Q8IYX7 474 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 GCNT2Q8N0V5 402 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 Q8N9W7 124 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 MDS2Q8NDY4 140 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 GOLGA5Q8TBA6 731 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 FAM46BQ96A09 425 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 C18orf25Q96B23 403 aaPredicted RBP0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 S1PR3Q99500 378 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 TSPY26PQ9H489 355 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 DCTPP1Q9H773 170 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ANKEF1Q9NU02 776 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ONECUT1Q9UBC0 465 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 TRPC4Q9UBN4 977 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 ATG4BQ9Y4P1 393 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 NLRC5Q86WI3 1866 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 AFF2P51816 1311 aa0.6□□□□□ -2.31
RNU2-55P-201ENST00000411146 METP08581 1390 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 ANKRD30BQ9BXX2 1392 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 IGLV4-69A0A075B6H9 119 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 IGLV4-60A0A075B6I1 120 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 A0A096LNJ9 63 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 A0A0G2JLM5 398 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 CYB561D2O14569 222 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SH2D1BO14796 132 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 HTATSF1O43719 755 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SEMG1P04279 462 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 RLN1P04808 185 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 FCER2P06734 321 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 VIMP08670 466 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TPBGLP0DKB5 382 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 GABRR1P24046 479 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 RPS9P46781 194 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SUCLG1P53597 346 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 FUT7Q11130 342 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SPOUT1Q5T280 376 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TSPO2Q5TGU0 170 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TRAT1Q6PIZ9 186 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 C16orf54Q6UWD8 224 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 BRD3OSQ6XYD6 125 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 THEM5Q8N1Q8 247 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 MTURNQ8N3F0 131 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 CADM2Q8N3J6 435 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF615Q8N8J6 731 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 UBTD2Q8WUN7 234 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 CKAP2Q8WWK9 683 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 C11orf24Q96F05 449 aaPredicted RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TMEM101Q96IK0 257 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 MBOAT4Q96T53 435 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 NAP1L4Q99733 375 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 LRRC2Q9BYS8 371 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLC17A9Q9BYT1 436 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 NANSQ9NR45 359 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 MMP26Q9NRE1 261 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 DDX28Q9NUL7 540 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 MARCH5Q9NX47 278 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 LCMT1Q9UIC8 334 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 NAP1L2Q9ULW6 460 aaPredicted RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 DIMT1Q9UNQ2 313 aaKnown RBP0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 TP53TG5Q9Y2B4 290 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 PPIAL4AQ9Y536 164 aa0.59□□□□□ -2.31
RNU2-55P-201ENST00000411146 SYNJ2O15056 1496 aa0.59□□□□□ -2.32
RNU2-55P-201ENST00000411146 A0A0U1RQS6 177 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 PSMB11A5LHX3 300 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 HTR3EA5X5Y0 456 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 ZNF233A6NK53 670 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 YJEFN3A6XGL0 299 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 COLCA2A8K830 154 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 C11orf94C9JXX5 98 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 RIPK2O43353 540 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 SDC3O75056 442 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 INSP01308 110 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 IGHV4-34P06331 123 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 PGK2P07205 417 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 CCDC175P0C221 793 aa0.58□□□□□ -2.32
RNU2-55P-201ENST00000411146 OR8U8P0C7N1 319 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms