RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 BNIP1Q12981 228 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 ART3Q13508 389 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 LASP1Q14847 261 aaKnown RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 RGNQ15493 299 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 PIGGQ5H8A4 983 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 RPS19BP1Q86WX3 136 aaKnown RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 SLC5A8Q8N695 610 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 SLC15A4Q8N697 577 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 SLC16A11Q8NCK7 471 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 OR8J3Q8NGG0 315 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 LCORQ96JN0 433 aaPredicted RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 ZNF354BQ96LW1 612 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 SH3GL1Q99961 368 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 CPPED1Q9BRF8 314 aaPredicted RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 ITPAQ9BY32 194 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 C1orf21Q9H246 121 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 PIGUQ9H490 435 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 SERHL2Q9H4I8 314 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 NANOGQ9H9S0 305 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 DUSP22Q9NRW4 184 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 ZMIZ1Q9ULJ6 1067 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 FAF1Q9UNN5 650 aaPredicted RBP14.09□□□□□ -0.15
LSM5-207ENST00000410044 CORO2BQ9UQ03 480 aa14.09□□□□□ -0.15
LSM5-207ENST00000410044 FRG2CA6NGY1 282 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 EVPLLA8MZ36 301 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 ACOX3O15254 700 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 DNAJB5O75953 348 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 AGR2O95994 175 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 ITGB2P05107 769 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 ACP2P11117 423 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 NAGAP17050 411 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 SLC6A2P23975 617 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 SOX11P35716 441 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 FADDQ13158 208 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 ZNHIT3Q15649 155 aaPredicted RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 MEP1AQ16819 746 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 CYP27C1Q4G0S4 372 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 CRB2Q5IJ48 1285 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 HLA-DQA1Q5Y7H0 255 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 TCTN3Q6NUS6 607 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 DNAJC14Q6Y2X3 702 aaPredicted RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 RNF130Q86XS8 419 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 FAM110BQ8TC76 370 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 ADAMTS15Q8TE58 950 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 SLC35A4Q96G79 324 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 AURKBQ96GD4 344 aaPredicted RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 SLC35G5Q96KT7 338 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 LMF1Q96S06 567 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 NXF5Q9H1B4 397 aaKnown RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 CDCP1Q9H5V8 836 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 PRORYQ9H606 182 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 ZNF552Q9H707 407 aaPredicted RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 IL1RL2Q9HB29 575 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 YARS2Q9Y2Z4 477 aaKnown RBP14.08□□□□□ -0.16
LSM5-207ENST00000410044 CPAMD8Q8IZJ3 1885 aa14.08□□□□□ -0.16
LSM5-207ENST00000410044 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 ASPMQ8IZT6 3477 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 C15orf38-AP3S2A0A0A6YYH1 394 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 B2RBV5 119 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 EBAG9O00559 213 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 NME6O75414 186 aaPredicted RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 NADKO95544 446 aaPredicted RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 GUSBP08236 651 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 ALOX5P09917 674 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 ITGA3P26006 1051 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 TRHRP34981 398 aaPredicted RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 CPOXP36551 454 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 CPA2P48052 419 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 NUDT2P50583 147 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 ANXA11P50995 505 aaKnown RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 CCL11P51671 97 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 NR0B1P51843 470 aaKnown RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 ZNF155Q12901 538 aaPredicted RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 TBR1Q16650 682 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 DUSP5Q16690 384 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 COX20Q5RI15 118 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 BORAQ6PGQ7 559 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 NPSR1Q6W5P4 371 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 SZRD1Q7Z422 152 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 HORMAD2Q8N7B1 307 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 OR7D2Q96RA2 312 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 OR51I1Q9H343 314 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 IKZF5Q9H5V7 419 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 KAT8Q9H7Z6 458 aaKnown RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 EQTNQ9NQ60 294 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 THUMPD1Q9NXG2 353 aaKnown RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 NDE1Q9NXR1 346 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.07□□□□□ -0.16
LSM5-207ENST00000410044 AP3M1Q9Y2T2 418 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 PCDHGB3Q9Y5G1 929 aa14.07□□□□□ -0.16
LSM5-207ENST00000410044 A8MUI8 341 aa14.06□□□□□ -0.16
LSM5-207ENST00000410044 HMGN4O00479 90 aa14.06□□□□□ -0.16
LSM5-207ENST00000410044 HNRNPCL1O60812 293 aaKnown RBP14.06□□□□□ -0.16
LSM5-207ENST00000410044 TNFRSF21O75509 655 aa14.06□□□□□ -0.16
LSM5-207ENST00000410044 ATP5HO75947 161 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms