RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 POLR1EQ9GZS1 481 aaKnown RBP4.31□□□□□ -1.72
SF3B1-202ENST00000409915 RAB33BQ9H082 229 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 NUAK2Q9H093 628 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 ADNPQ9H2P0 1102 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 ARMC7Q9H6L4 198 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 ATP13A3Q9H7F0 1226 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 CXorf36Q9H7Y0 433 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 LRRC40Q9H9A6 602 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 KCNK13Q9HB14 408 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 CPNE5Q9HCH3 593 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 KCNK9Q9NPC2 374 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 ZDHHC18Q9NUE0 388 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 MRPL39Q9NYK5 338 aaKnown RBP4.31□□□□□ -1.72
SF3B1-202ENST00000409915 TAS2R1Q9NYW7 299 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 SMARCAL1Q9NZC9 954 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 KLHL8Q9P2G9 620 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-202ENST00000409915 LGALS13Q9UHV8 139 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 TEKT2Q9UIF3 430 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 CNOT11Q9UKZ1 510 aaKnown RBP4.31□□□□□ -1.72
SF3B1-202ENST00000409915 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 RAI2Q9Y5P3 530 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 AUP1Q9Y679 476 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 MAU2Q9Y6X3 613 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 PCDH15Q96QU1 1955 aa4.31□□□□□ -1.72
SF3B1-202ENST00000409915 A0A1W2PR77 199 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CDHR4A6H8M9 788 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NPIPB13A6NJU9 1138 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 C4orf47A7E2U8 309 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NPIPB5A8MRT5 1133 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NPIPB4C9JG80 1138 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 F8WDY8 70 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CDX4O14627 284 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TOR1AO14656 332 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 KCNN4O15554 427 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SDC3O75056 442 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 LRP3O75074 770 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PMPCBO75439 489 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TM7SF2O76062 418 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 MYO1DO94832 1006 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 WDR47O94967 919 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PGLSO95336 258 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SLC16A8O95907 504 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 IL18BPO95998 194 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PAK4O96013 591 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 MT-CYBP00156 380 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SERPINF2P08697 491 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TFPTP0C1Z6 253 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PIRTP0C851 137 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 THRBP10828 461 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GNSP15586 552 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ITGB6P18564 788 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 LHCGRP22888 699 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 DCKP27707 260 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 POU1F1P28069 291 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PSMB4P28070 264 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CD38P28907 300 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 UQCRC1P31930 480 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 FRKP42685 505 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-202ENST00000409915 OR3A3P47888 321 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GLRBP48167 497 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CSNK1DP48730 415 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF134P52741 427 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ARSFP54793 590 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 NAGLUP54802 743 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PRRX1P54821 245 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 LOXL3P58215 753 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TAS2R50P59544 299 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 MYBPC1Q00872 1141 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CD300CQ08708 224 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 DLG1Q12959 904 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 STX3Q13277 289 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SNTA1Q13424 505 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 DOC2AQ14183 400 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ACOX1Q15067 660 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 CDK10Q15131 360 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 IRF4Q15306 451 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TSC22D1Q15714 1073 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 UGP2Q16851 508 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 DUOXA1Q1HG43 343 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 KIF19Q2TAC6 998 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 AP5B1Q2VPB7 878 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZBED5Q49AG3 693 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SFT2D3Q587I9 215 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF542PQ5EBM4 170 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TCTE1Q5JU00 501 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SPATA46Q5T0L3 261 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ARMC12Q5T9G4 340 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 STPG1Q5TH74 334 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 PRAMEF8Q5VWM4 474 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM200BQ69YZ2 307 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 KIAA1161Q6NSJ0 714 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GALNT18Q6P9A2 607 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 SLC23A3Q6PIS1 610 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 BRAT1Q6PJG6 821 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 OGFOD3Q6PK18 319 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 GCNT7Q6ZNI0 430 aa4.3□□□□□ -1.72
SF3B1-202ENST00000409915 RFLNAQ6ZTI6 216 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms