RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PPM1BO75688 479 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 GLSO94925 669 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ABOP16442 354 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 DDX5P17844 614 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 RPL3P39023 403 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 MANFP55145 182 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 EMX2Q04743 252 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 HSPB3Q12988 150 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ATG16L1Q676U5 607 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 NUP54Q7Z3B4 507 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TRIM42Q8IWZ5 723 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZFP28Q8NHY6 868 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 RELTQ969Z4 430 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 OMA1Q96E52 524 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZBED6CLQ96FA7 236 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 JSRP1Q96MG2 331 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 VSTM2LQ96N03 204 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 BTBD9Q96Q07 612 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 SECISBP2Q96T21 854 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 DOHHQ9BU89 302 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 PROK2Q9HC23 129 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 THAP1Q9NVV9 213 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 BOKQ9UMX3 212 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 EML6Q6ZMW3 1958 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ASH1LQ9NR48 2969 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 A0A1B0GTH9 108 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ANKRD33BA6NCL7 494 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 UPK1AO00322 258 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TO15178 435 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 REM1O75628 298 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 LDLRP01130 860 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 CT45A8P0DMV1 189 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 CT45A9P0DMV2 189 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 GPC1P35052 558 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 PER3P56645 1201 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 CORO7P57737 925 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF155Q12901 538 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 PTGR1Q14914 329 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 SMU1Q2TAY7 513 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 CT45A2Q5DJT8 189 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TBCELQ5QJ74 424 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TMEM198Q66K66 360 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 PAOXQ6QHF9 649 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC44A2Q8IWA5 706 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC34A3Q8N130 599 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 OR2L13Q8N349 312 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TMEM251Q8N6I4 163 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 TMBIM1Q969X1 311 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 NUF2Q9BZD4 464 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 MANSC1Q9H8J5 431 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 AKTIPQ9H8T0 292 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZFP64Q9NPA5 681 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ATP6V1HQ9UI12 483 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF835Q9Y2P0 537 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 SPTAN1Q13813 2472 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 WIPF3A6NGB9 483 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 CCL21O00585 134 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 SCAMP2O15127 329 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 RNF224P0DH78 156 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 G6PDP11413 515 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 H2AFXP16104 143 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 KRT20P35900 424 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 CA7P43166 264 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 MAGEA5P43359 124 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 C3AR1Q16581 482 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 HYAL4Q2M3T9 481 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 BICRALQ6AI39 1079 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 FAM109AQ8N4B1 249 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 GOLGA6L1Q8N7Z2 621 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 OR7A2PQ8NGA2 310 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 RAB3IL1Q8TBN0 382 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 ATP6V1G3Q96LB4 118 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 PSMG3-AS1Q96PY0 264 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 PRPF18Q99633 342 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 ANGPTL4Q9BY76 406 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 METTL7AQ9H8H3 244 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 ZDHHC11Q9H8X9 412 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 ACSS1Q9NUB1 689 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 NOP53Q9NZM5 478 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 OR10H1Q9Y4A9 318 aa16.47■□□□□ 0.23
PDLIM2-206ENST00000409141 SNNO75324 88 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 SNX4O95219 450 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 LAMP1P11279 417 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 PRPS1L1P21108 318 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 PTGS2P35354 604 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 CASP3P42574 277 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 FRKP42685 505 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 PSPHP78330 225 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC10A1Q14973 349 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 CPTPQ5TA50 214 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 DESI1Q6ICB0 168 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 NPSR1Q6W5P4 371 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 Q6ZPB1 254 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 FGD2Q7Z6J4 655 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 PACS2Q86VP3 889 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 CHERPQ8IWX8 916 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 KRTCAP2Q8N6L1 136 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 HGDQ93099 445 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 RILPQ96NA2 401 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 ATAD3AQ9NVI7 634 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms