RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PEX14O75381 377 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 WNT1P04628 370 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.47
HERC3-203ENST00000407637 EPORP19235 508 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 PRMT2P55345 433 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 ARHGEF7Q14155 803 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 MBTPS1Q14703 1052 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 UAP1L1Q3KQV9 507 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 SLC25A25Q6KCM7 469 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 CIR1Q86X95 450 aaPredicted RBP12.08□□□□□ -0.47
HERC3-203ENST00000407637 LKAAEAR1Q8TD35 194 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 ACOT12Q8WYK0 555 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 TINF2Q9BSI4 451 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 YIPF4Q9BSR8 244 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 SYT17Q9BSW7 474 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 DUSP26Q9BV47 211 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 NIT2Q9NQR4 276 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.47
HERC3-203ENST00000407637 ACSL6Q9UKU0 697 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 AP1M2Q9Y6Q5 423 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 PTPRDP23468 1912 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 A0A0U1RQF3 1178 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 TRBC2A0A5B9 178 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 RFXAPO00287 272 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 RECKO95980 971 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 IGF2P01344 180 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 OPRD1P41143 372 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 VEGFCP49767 419 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 RAG2P55895 527 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 Q3ZCU0 254 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 FBXO16Q8IX29 292 aaPredicted RBP12.08□□□□□ -0.48
HERC3-203ENST00000407637 OR8J2Q8NGG1 315 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 OR5M9Q8NGP3 310 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
HERC3-203ENST00000407637 POLR2J3Q9H1A7 115 aaKnown RBP12.08□□□□□ -0.48
HERC3-203ENST00000407637 GPATCH2Q9NW75 528 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
HERC3-203ENST00000407637 CA5BQ9Y2D0 317 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 CHD5Q8TDI0 1954 aa12.08□□□□□ -0.48
HERC3-203ENST00000407637 TO15178 435 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 FZD7O75084 574 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SPDEFO95238 335 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SMIM6P0DI80 62 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PPP3CBP16298 524 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 GJA1P17302 382 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PTAFRP25105 342 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 MST1P26927 711 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 RGS4P49798 205 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 LIM2P55344 173 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 TNFRSF17Q02223 184 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 LGALS3BPQ08380 585 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 GCNT6Q5T4J0 391 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PYHIN1Q6K0P9 492 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 NHLRC1Q6VVB1 395 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 LDLRAD3Q86YD5 345 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SGK3Q96BR1 496 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SMARCD1Q96GM5 515 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PRDM9Q9NQV7 894 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 GPN3Q9UHW5 284 aaPredicted RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 CORO2BQ9UQ03 480 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 KIAA1671Q9BY89 1806 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 OR2W5A6NFC9 320 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 C2orf81A6NN90 581 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 AGAP14A8MT82 685 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 STK16O75716 305 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 TRBC1P01850 177 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 ACVRL1P37023 503 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 HBMQ6B0K9 141 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 DBX2Q6ZNG2 339 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 NAXDQ8IW45 347 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 FAM26EQ8N5C1 309 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PXT1Q8NFP0 134 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 CSGALNACT1Q8TDX6 532 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ZFP3Q96NJ6 502 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 PTDSS2Q9BVG9 487 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 CIPCQ9C0C6 399 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 C11orf49Q9H6J7 331 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ISYNA1Q9NPH2 558 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 TMEM161AQ9NX61 479 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 DCAF16Q9NXF7 216 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SPHK1Q9NYA1 384 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 RASD1Q9Y272 281 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 IRAK3Q9Y616 596 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 ZNF106Q9H2Y7 1883 aaKnown RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 MYO16Q9Y6X6 1858 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 SLC28A2O43868 658 aa12.07□□□□□ -0.48
HERC3-203ENST00000407637 GALR3O60755 368 aaPredicted RBP12.07□□□□□ -0.48
HERC3-203ENST00000407637 IFNW1P05000 195 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms