RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZNF486Q96H40 463 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 SENP5Q96HI0 755 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 KATNB1Q9BVA0 655 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 SARGQ9BW04 601 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 POLR2J2Q9GZM3 115 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 PITHD1Q9GZP4 211 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 NUAK2Q9H093 628 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 SPHK1Q9NYA1 384 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 NPAP1Q9NZP6 1156 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 APOBEC3BQ9UH17 382 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 A0A1W2PQ09 198 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 C5orf58C9J3I9 102 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SLC9A3R1O14745 358 aaPredicted RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 PLA2G10O15496 165 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 PDE9AO76083 593 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 RAB36O95755 333 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 MYOGP15173 224 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 CTNNB1P35222 781 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 GSTM5P46439 218 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ST8SIA6P61647 398 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 PLAURQ03405 335 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 C3orf38Q5JPI3 329 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 THOC7Q6I9Y2 204 aaKnown RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 SHFQ7M4L6 423 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 NR2C2APQ86WQ0 139 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SDR16C5Q8N3Y7 309 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 OR8K5Q8NH50 307 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 C10orf90Q96M02 699 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 RACGAP1Q9H0H5 632 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ABCB9Q9NP78 766 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 AHSPQ9NZD4 102 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 PCDHGB2Q9Y5G2 931 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 C5orf67F2Z3F1 127 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 DNAJB6O75190 326 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 F3P13726 295 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SOX6P35712 828 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 NCBP2P52298 156 aaKnown RBP eCLIP9.24□□□□□ -0.933e-9■■□□□ 13.2
MSH2-202ENST00000406134 HOXC5Q00444 222 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ENPP2Q13822 863 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 C22orf42Q6IC83 251 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ABHD17CQ6PCB6 329 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TMEM107Q6UX40 140 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 FAM92BQ6ZTR7 304 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 GALNT6Q8NCL4 622 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TMEM163Q8TC26 289 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 XAGE5Q8WWM1 108 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TM9SF2Q99805 663 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TMCC3Q9ULS5 477 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 N6AMT1Q9Y5N5 214 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TMEM129A0AVI4 362 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 LINC01553A4QN01 128 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 MID1O15344 667 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 EML2O95834 649 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ACP2P11117 423 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 CAV3P56539 151 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TPBGQ13641 420 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SPANXN2Q5MJ10 180 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 FAM46CQ5VWP2 391 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 FAM111BQ6SJ93 734 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 FLVCR1-AS1Q8TAF5 88 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SETD6Q8TBK2 473 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 CXorf40AQ8TE69 158 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 CAMK1GQ96NX5 476 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 OR7D2Q96RA2 312 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ZNF607Q96SK3 696 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 ARHGAP9Q9BRR9 750 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 SAP130Q9H0E3 1048 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 TP63Q9H3D4 680 aaPredicted RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 ZCCHC3Q9NUD5 404 aaKnown RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 CNIH4Q9P003 139 aa9.24□□□□□ -0.93
MSH2-202ENST00000406134 THAP10Q9P2Z0 257 aaPredicted RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 RABL2AQ9UBK7 228 aaPredicted RBP9.24□□□□□ -0.93
MSH2-202ENST00000406134 SMIM30A4D0T7 59 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 A6NL46 340 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 OR52A4PA6NMU1 304 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 PIP5K1CO60331 668 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 UBXN7O94888 489 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CDRT1O95170 752 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 IL1AP01583 271 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CEACAM5P06731 702 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CHRM5P08912 532 aaPredicted RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 DRD2P14416 443 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 HIST1H1TP22492 207 aaPredicted RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 ATP5A1P25705 553 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 CERS1P27544 350 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 RORCP51449 518 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CHRNEQ04844 493 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 MXD1Q05195 221 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 COX10Q12887 443 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 LASP1Q14847 261 aaKnown RBP9.23□□□□□ -0.93
MSH2-202ENST00000406134 LTB4RQ15722 352 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 SMUG1Q53HV7 270 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 Q5BKY6 102 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 EOGTQ5NDL2 527 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 AADACL4Q5VUY2 407 aa9.23□□□□□ -0.93
MSH2-202ENST00000406134 CACUL1Q86Y37 369 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms