RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TRIM46Q7Z4K8 759 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 CDH24Q86UP0 819 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 CCDC71Q8IV32 467 aaPredicted RBP12.28□□□□□ -0.44
VCX3A-202ENST00000398729 C4orf33Q8N1A6 199 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 SIMC1Q8NDZ2 872 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 OR9A2Q8NGT5 310 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 OMA1Q96E52 524 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 TMEM41AQ96HV5 264 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 METTL7AQ9H8H3 244 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 SLC35C2Q9NQQ7 365 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 PCDHGB3Q9Y5G1 929 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
VCX3A-202ENST00000398729 C15orf38-AP3S2A0A0A6YYH1 394 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 TLDC2A0PJX2 215 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 FRG2CA6NGY1 282 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 FAM90A27PA6NNH2 459 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 FAM47E-STBD1D6RA91 191 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 RSL1D1O76021 490 aaKnown RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 GLI4P10075 376 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 DDCP20711 480 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 SOX18P35713 384 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 TLE4Q04727 773 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 SLC18A2Q05940 514 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 C2orf80Q0P641 193 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 TOMM20Q15388 145 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 CEBPEQ15744 281 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 C1orf185Q5T7R7 199 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 LIPMQ5VYY2 423 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 RTL6Q6ICC9 239 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 SLC30A6Q6NXT4 461 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 TMEM81Q6P7N7 255 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 MEX3BQ6ZN04 569 aaKnown RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 FAM9CQ8IZT9 166 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 FAM76AQ8TAV0 307 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 KAT2AQ92830 837 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 GNRHR2Q96P88 292 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 BBS4Q96RK4 519 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 TREX2Q9BQ50 279 aaPredicted RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 C12orf65Q9H3J6 166 aaKnown RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 MCCC2Q9HCC0 563 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 MIEF1Q9NQG6 463 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 RRAGDQ9NQL2 400 aaPredicted RBP12.27□□□□□ -0.45
VCX3A-202ENST00000398729 SENP1Q9P0U3 644 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 C15orf41Q9Y2V0 281 aa12.27□□□□□ -0.45
VCX3A-202ENST00000398729 NKX2-6A6NCS4 301 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 TO15178 435 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 HPNP05981 417 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 UROSP10746 265 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 ZFP36L2P47974 494 aaKnown RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 CDK9P50750 372 aaKnown RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 SNTA1Q13424 505 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 FNDC7Q5VTL7 733 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 TIGD3Q6B0B8 471 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 C10orf107Q8IVU9 208 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 RIBC1Q8N443 379 aaPredicted RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 OR1J4Q8NGS1 313 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 HGDQ93099 445 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 TMCO6Q96DC7 493 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 BTBD9Q96Q07 612 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 OSBPL11Q9BXB4 747 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 UCK2Q9BZX2 261 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 STMN4Q9H169 189 aaPredicted RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 UBQLN3Q9H347 655 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 ANKRA2Q9H9E1 313 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 MYNNQ9NPC7 610 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 GPR55Q9Y2T6 319 aaPredicted RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 WBP11Q9Y2W2 641 aaKnown RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 POLR3HQ9Y535 204 aaPredicted RBP12.26□□□□□ -0.45
VCX3A-202ENST00000398729 FREM3P0C091 2139 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 ABCA4P78363 2273 aa12.26□□□□□ -0.45
VCX3A-202ENST00000398729 INTS1Q8N201 2190 aaKnown RBP12.25□□□□□ -0.45
VCX3A-202ENST00000398729 A0A0G2JNJ9 132 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 OR6C70A6NIJ9 312 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 GNB5O14775 395 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 PLOD3O60568 738 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TRIM13O60858 407 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 ABCB7O75027 752 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 ICOSLGO75144 302 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 UGT2B11O75310 529 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 ERN1O75460 977 aaKnown RBP12.25□□□□□ -0.45
VCX3A-202ENST00000398729 REM1O75628 298 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 TOXO94900 526 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 NUDT17P0C025 328 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
VCX3A-202ENST00000398729 KRT20P35900 424 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 PSPHP78330 225 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 PCLAFQ15004 111 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 CLEC6AQ6EIG7 209 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 DESI1Q6ICB0 168 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 FAM71E1Q6IPT2 247 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 NOXRED1Q6NXP6 359 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
VCX3A-202ENST00000398729 ULK2Q8IYT8 1036 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms