RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 RAB8BQ92930 207 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 TREX2Q9BQ50 279 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SORBS1Q9BX66 1292 aaKnown RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 TOR4AQ9NXH8 423 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 AHSPQ9NZD4 102 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SEC14L3Q9UDX4 400 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CDH10Q9Y6N8 788 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SNTNA6NMZ2 147 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 LRRTM2O43300 516 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 HPGDSO60760 199 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 EPPINO95925 133 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 ARSBP15848 533 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 GALP22466 123 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 RAB25P57735 213 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CEP78Q5JTW2 689 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 LY6G5CQ5SRR4 150 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CCNJQ5T5M9 372 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 GLCCI1Q86VQ1 547 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 KIF18BQ86Y91 864 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 FAM109AQ8N4B1 249 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 POGLUT1Q8NBL1 392 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 VN1R2Q8NFZ6 395 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 RNFT2Q96EX2 444 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SENP5Q96HI0 755 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 PRRC1Q96M27 445 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 LRRC3BQ96PB8 259 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 UBL7Q96S82 380 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 RHBGQ9H310 441 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SFXN1Q9H9B4 322 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 COMMD3Q9UBI1 195 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 POLHQ9Y253 713 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 FAM240BA0A1B0GVZ2 78 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 PI15O43692 258 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 ORC5O43913 435 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 LEFTY1O75610 366 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 OR2B3O76000 313 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 BSGP35613 385 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 MTNR1AP48039 350 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 CAV3P56539 151 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 MAB21L1Q13394 359 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 IKZF1Q13422 519 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 SNAPC1Q16533 368 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 FAM180BQ6P0A1 224 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 LCTLQ6UWM7 567 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 RFPL4BQ6ZWI9 263 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-207ENST00000396581 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 CREB3L1Q96BA8 519 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 CDCA3Q99618 268 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF649Q9BS31 505 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 FNDC11Q9BVV2 318 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 MKRN2Q9H000 416 aaKnown RBP12.54□□□□□ -0.4
TRIM40-207ENST00000396581 ACSS1Q9NUB1 689 aaPredicted RBP12.54□□□□□ -0.4
TRIM40-207ENST00000396581 NLKQ9UBE8 527 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 MSRAQ9UJ68 235 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 CCDC88CQ9P219 2028 aa12.54□□□□□ -0.4
TRIM40-207ENST00000396581 M0R3H8 397 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 CASKO14936 926 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SH3BP5O60239 455 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 CHRM5P08912 532 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 HK1P19367 917 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 PBLDP30039 288 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 BTG1P62324 171 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 WSCD2Q2TBF2 565 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 LIPIQ6XZB0 460 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 FAM83HQ6ZRV2 1179 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ABI3BPQ7Z7G0 1075 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 IQCHQ86VS3 1027 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 NRSN1Q8IZ57 195 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 AP2M1Q96CW1 435 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 NKX2-4Q9H2Z4 354 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 TRIM45Q9H8W5 580 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 BCL2L10Q9HD36 194 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 STMN3Q9NZ72 180 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SHISA3A0PJX4 238 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 M6PRP20645 277 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ACADLP28330 430 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 MMP12P39900 470 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SLC1A3P43003 542 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 MAPK12P53778 367 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF155Q12901 538 aaPredicted RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 RAB30Q15771 203 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SYPL1Q16563 259 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 BTBD16Q32M84 506 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
TRIM40-207ENST00000396581 SLC27A4Q6P1M0 643 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
TRIM40-207ENST00000396581 LMNTD1Q8N9Z9 388 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms