RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CLK3P49761 638 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 PDX1P52945 283 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 MAPK10P53779 464 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 TUBA4AP68366 448 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 KEAP1Q14145 624 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 GANABQ14697 944 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 AMZ1Q400G9 498 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 WDR74Q6RFH5 385 aaPredicted RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 FRRS1Q6ZNA5 592 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 C16orf62Q7Z3J2 963 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 GATAD2AQ86YP4 633 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 OR52J3Q8NH60 311 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 FBLIM1Q8WUP2 373 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 FEVQ99581 238 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 DUSP23Q9BVJ7 150 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 PINK1Q9BXM7 581 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 GABARAPL3Q9BY60 117 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 FAM192AQ9GZU8 254 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 QRSL1Q9H0R6 528 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 PIGUQ9H490 435 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ADAP2Q9NPF8 381 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 U3KQA8 63 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 SYT5O00445 386 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 BCKDKO14874 412 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 PCDH17O14917 1159 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 CTNSO60931 367 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 UGT2B11O75310 529 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 BMP10O95393 424 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 MSL3P1P0C860 447 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ANXA8P13928 327 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 CDH2P19022 906 aaPredicted RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 RYKP34925 604 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 MAP4K2Q12851 820 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ARHGAP11BQ3KRB8 267 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ZCCHC12Q6PEW1 402 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 SLC5A8Q8N695 610 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 OR4C6Q8NH72 309 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 DOK4Q8TEW6 326 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 CCDC74AQ96AQ1 378 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 ZC3H10Q96K80 434 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 PITX2Q99697 317 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
CCT4-201ENST00000394440 NDRG4Q9ULP0 352 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 MRPS33Q9Y291 106 aaKnown RBP13.97□□□□□ -0.17
CCT4-201ENST00000394440 FCMRO60667 390 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 CBX7O95931 251 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 PNLIPP16233 465 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 ELK4P28324 431 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 EPHA2P29317 976 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 AVPR1BP47901 424 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 SEPHS1P49903 392 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 RPS6KA3P51812 740 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 CD47Q08722 323 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 DUSP8Q13202 625 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 RAPSNQ13702 412 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 CTU2Q2VPK5 515 aaKnown RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 LAIR2Q6ISS4 152 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 Q8N9G6 341 aaPredicted RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 CDRT4Q8N9R6 151 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 CHDHQ8NE62 594 aaPredicted RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 VANGL1Q8TAA9 524 aaPredicted RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 SLC9A6Q92581 669 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 PIGKQ92643 395 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 ZG16BQ96DA0 208 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 MMABQ96EY8 250 aaPredicted RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 RIBC2Q9H4K1 309 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 DUSP22Q9NRW4 184 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 TUBA8Q9NY65 449 aaPredicted RBP13.96□□□□□ -0.17
CCT4-201ENST00000394440 A4GNTQ9UNA3 340 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 CHST2Q9Y4C5 530 aa13.96□□□□□ -0.17
CCT4-201ENST00000394440 M0R3H8 397 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 S1PR1P21453 382 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 NR1H2P55055 460 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 CDH15P55291 814 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 HLA-BQ31612 363 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 MLIPQ5VWP3 458 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 ZNF770Q6IQ21 691 aaPredicted RBP13.96□□□□□ -0.18
CCT4-201ENST00000394440 HMGN2P46Q86SG4 172 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 SATL1Q86VE3 508 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 KMT5CQ86Y97 462 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 STACQ99469 402 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 FUZQ9BT04 418 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 CXorf21Q9HAI6 301 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.18
CCT4-201ENST00000394440 FSCN3Q9NQT6 498 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 IRAK4Q9NWZ3 460 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 RHCGQ9UBD6 479 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 SATB2Q9UPW6 733 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 SEC16AO15027 2179 aa13.96□□□□□ -0.18
CCT4-201ENST00000394440 ALPPP05187 535 aa13.95□□□□□ -0.18
CCT4-201ENST00000394440 CBLP22681 906 aa13.95□□□□□ -0.18
CCT4-201ENST00000394440 NPRL3Q12980 569 aa13.95□□□□□ -0.18
CCT4-201ENST00000394440 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
CCT4-201ENST00000394440 EXOSC7Q15024 291 aaKnown RBP13.95□□□□□ -0.18
CCT4-201ENST00000394440 TYW3Q6IPR3 259 aaKnown RBP13.95□□□□□ -0.18
CCT4-201ENST00000394440 DHRS4L2Q6PKH6 230 aa13.95□□□□□ -0.18
CCT4-201ENST00000394440 DEF8Q6ZN54 512 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms