RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LIMS3P0CW19 117 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 LIMS4P0CW20 117 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 HNRNPCL4P0DMR1 293 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 GABRA5P31644 462 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 FABP5Q01469 135 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 LASP1Q14847 261 aaKnown RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 PPP2R2DQ66LE6 453 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ANKK1Q8NFD2 765 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 OR52P1PQ8NH57 321 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 LILRB4Q8NHJ6 448 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 SFXN5Q8TD22 340 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 GNPDA2Q8TDQ7 276 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 SLC7A6Q92536 515 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 AP3S1Q92572 193 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 RSPRY1Q96DX4 576 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 FAIM2Q9BWQ8 316 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ANKRA2Q9H9E1 313 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 PLA2G10O15496 165 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 PCCBP05166 539 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 HMGN2P05204 90 aaKnown RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 FGF9P31371 208 aaPredicted RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 CD79BP40259 229 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 P2RY2P41231 377 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ANXA11P50995 505 aaKnown RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 CDK3Q00526 305 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 GNA13Q14344 377 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 CDK10Q15131 360 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 PYDC2Q56P42 97 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 KIAA1161Q6NSJ0 714 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 CD200R1LQ6Q8B3 271 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ADCK2Q7Z695 626 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 CAMKK1Q8N5S9 505 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ZNF485Q8NCK3 441 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 GDF15Q99988 308 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ARHGAP9Q9BRR9 750 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 PRR14Q9BWN1 585 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 QRSL1Q9H0R6 528 aaKnown RBP17.72■□□□□ 0.43
CBX1-202ENST00000393408 KLHL31Q9H511 634 aa17.72■□□□□ 0.43
CBX1-202ENST00000393408 ALPPP05187 535 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 SLC35G4P0C7Q5 338 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 ALPPL2P10696 532 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 ZNF24P17028 368 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 CLCNKAP51800 687 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 RTL10Q7L3V2 364 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 PRICKLE2Q7Z3G6 844 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 SFTPA1Q8IWL2 248 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 ASCC1Q8N9N2 400 aaKnown RBP17.71■□□□□ 0.43
CBX1-202ENST00000393408 RNF170Q96K19 258 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 GSTK1Q9Y2Q3 226 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 KCNE3Q9Y6H6 103 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 NUMA1Q14980 2115 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 A0A0B4J293 547 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 FAM170BA6NMN3 283 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 EPCAMP16422 314 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 MYL9P24844 172 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 SSTR4P31391 388 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 DUSP2Q05923 314 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 MAP4K2Q12851 820 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 TSPAN31Q12999 210 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 ZNF234Q14588 700 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.71■□□□□ 0.433e-7■■■■■ 31.4
CBX1-202ENST00000393408 GPAT3Q53EU6 434 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 SHFQ7M4L6 423 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 GALNT12Q8IXK2 581 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 RNF31Q96EP0 1072 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 SLC38A2Q96QD8 506 aa17.71■□□□□ 0.43
CBX1-202ENST00000393408 C4orf51C9J302 202 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 PGRMC2O15173 223 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 ERAL1O75616 437 aaKnown RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 STATHP02808 62 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 KIR2DL3P43628 341 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 CAV3P56539 151 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 TAS2R41P59536 307 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 PRDX1Q06830 199 aaKnown RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 ZIC1Q15915 447 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 ZNF750Q32MQ0 723 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 TMEM35AQ53FP2 167 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 BHLHB9Q6PI77 547 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 RASSF6Q6ZTQ3 369 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 ZFP41Q8N8Y5 198 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 C16orf58Q96GQ5 468 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 CAMK1GQ96NX5 476 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 DEPDC7Q96QD5 511 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 RNF121Q9H920 327 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 NUFIP1Q9UHK0 495 aaKnown RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 DNMT3AQ9Y6K1 912 aaPredicted RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 TRDV1A0A1B0GX56 115 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 IFNGR2P38484 337 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 RACK1P63244 317 aaKnown RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 HOXC5Q00444 222 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 SLC9A5Q14940 896 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 GAB4Q2WGN9 574 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 PRAMEF8Q5VWM4 474 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 PRAMEF7Q5VXH5 474 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 ATP6V1C2Q8NEY4 427 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 CNRIP1Q96F85 164 aaPredicted RBP17.7■□□□□ 0.42
CBX1-202ENST00000393408 ARHGDIGQ99819 225 aa17.7■□□□□ 0.42
CBX1-202ENST00000393408 TTYH2Q9BSA4 534 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms