RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 SH3BP4Q9P0V3 963 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 EIF3LQ9Y262 564 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 KLF13Q9Y2Y9 288 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 PCDHGB6Q9Y5F9 930 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 HIVEP1P15822 2718 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 A1L4Q6 167 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 HMGB1P1B2RPK0 211 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-202ENST00000380747 G3V3Y1 287 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 PDPK1O15530 556 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 PEX1O43933 1283 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 BCAS2O75934 225 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-202ENST00000380747 CLDN1O95832 211 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 CBX7O95931 251 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 LDLRP01130 860 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 KITP10721 976 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 S1PR1P21453 382 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 GPX3P22352 226 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 HPCAL1P37235 193 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 RFC3P40938 356 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ASMTP46597 345 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 MEOX1P50221 254 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 GPR85P60893 370 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ALDH6A1Q02252 535 aaKnown RBP8.52□□□□□ -1.05
HMGN1-202ENST00000380747 DUSP8Q13202 625 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 NNATQ16517 81 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 FIGNL1Q6PIW4 674 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 TMEM107Q6UX40 140 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 TMEM64Q6YI46 380 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 SULF2Q8IWU5 870 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 PRR22Q8IZ63 422 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 SLC34A3Q8N130 599 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 SLC15A4Q8N697 577 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 PSD4Q8NDX1 1056 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 OR5M3Q8NGP4 307 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 DNAJB8Q8NHS0 232 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 C16orf52Q8NHV5 167 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 RAB3IL1Q8TBN0 382 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 NR4A3Q92570 626 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 TP53INP1Q96A56 240 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 CTHRC1Q96CG8 243 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 SH3GL2Q99962 352 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ITPAQ9BY32 194 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ACBD3Q9H3P7 528 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 AKTIPQ9H8T0 292 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 THAP1Q9NVV9 213 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 TAS2R7Q9NYW3 318 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 MARCOQ9UEW3 520 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-202ENST00000380747 PRODH2Q9UF12 536 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF639Q9UID6 485 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 CFL2Q9Y281 166 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 DTX4Q9Y2E6 619 aa8.52□□□□□ -1.05
HMGN1-202ENST00000380747 ASPDHA6ND91 283 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ANKUB1A6NFN9 424 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 CAPN14A8MX76 684 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NPIPA5E9PKD4 350 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NME6O75414 186 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 SASH3O75995 380 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 P04436 131 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 G6PDP11413 515 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 PRPS2P11908 318 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 EDN3P14138 238 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 DDX5P17844 614 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 MST1P26927 711 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 SOX18P35713 384 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 RPL3P39023 403 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 MC3RP41968 323 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NRG3P56975 720 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 EMX2Q04743 252 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 HSPB3Q12988 150 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 PTGR1Q14914 329 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 CEBPEQ15744 281 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 EIF2S3LQ2VIR3 472 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF791Q3KP31 576 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF385BQ569K4 471 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF551Q7Z340 670 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 R3HCC1LQ7Z5L2 792 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 CPSF7Q8N684 471 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 GOLM1Q8NBJ4 401 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 OR7G2Q8NG99 324 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZFP28Q8NHY6 868 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 LRRC8CQ8TDW0 803 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 DYDC1Q8WWB3 177 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ZNF75CPQ92670 426 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 ADIPOR1Q96A54 375 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 CIDECQ96AQ7 238 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 SPACA9Q96E40 222 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 LCORQ96JN0 433 aaPredicted RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 SGCZQ96LD1 299 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 AMDHD1Q96NU7 426 aa8.51□□□□□ -1.05
HMGN1-202ENST00000380747 BARD1Q99728 777 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 NXF5Q9H1B4 397 aaKnown RBP8.51□□□□□ -1.05
HMGN1-202ENST00000380747 GLIPR2Q9H4G4 154 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms