RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 FGF11Q92914 225 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 NACC2Q96BF6 587 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 VMP1Q96GC9 406 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 REXO5Q96IC2 774 aaKnown RBP12.03□□□□□ -0.48
CBWD3-203ENST00000377344 VPS50Q96JG6 964 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 ITPAQ9BY32 194 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 P4HTMQ9NXG6 502 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 SLC7A8Q9UHI5 535 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 CFL2Q9Y281 166 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 AHCTF1Q8WYP5 2266 aa12.03□□□□□ -0.48
CBWD3-203ENST00000377344 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 C2orf92A0A1B0GVN3 265 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 ELOVL7A1L3X0 281 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 CFAP73A6NFT4 308 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 PRKNO60260 465 aaPredicted RBP12.02□□□□□ -0.48
CBWD3-203ENST00000377344 TNFRSF21O75509 655 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 CIB2O75838 187 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 ACP2P11117 423 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 GABRA3P34903 492 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 GZMMP51124 257 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 GPR143P51810 404 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 CORO7P57737 925 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 CLN3Q13286 438 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 DUSP5Q16690 384 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 ATAD3BQ5T9A4 648 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 PGM2L1Q6PCE3 622 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 ZCCHC12Q6PEW1 402 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 HSDL2Q6YN16 418 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 MRGPREQ86SM8 312 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 C9orf40Q8IXQ3 194 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 ZZZ3Q8IYH5 903 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 LGI4Q8N135 537 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 COX18Q8N8Q8 333 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 TNIP2Q8NFZ5 429 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 MIPOL1Q8TD10 442 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 THUMPD1Q9NXG2 353 aaKnown RBP12.02□□□□□ -0.48
CBWD3-203ENST00000377344 FBXL4Q9UKA2 621 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 KCNE3Q9Y6H6 103 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 FREM2Q5SZK8 3169 aa12.02□□□□□ -0.48
CBWD3-203ENST00000377344 SPTBN4Q9H254 2564 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 AKAP13Q12802 2813 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 OR6C76A6NM76 312 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 C5orf58C9J3I9 102 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 MASP2O00187 686 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 ASNA1O43681 348 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 GMNNO75496 209 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 AGR2O95994 175 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 BCHEP06276 602 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 ADRB1P08588 477 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 NR2F1P10589 423 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 NCK1P16333 377 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 MAGEA8P43361 318 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 RFX3P48380 749 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 MAN2A2P49641 1150 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 CLCN2P51788 898 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
CBWD3-203ENST00000377344 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.49
CBWD3-203ENST00000377344 ATP1A4Q13733 1029 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 MYBPC3Q14896 1274 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 ADRM1Q16186 407 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 EXT1Q16394 746 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 VMACQ2NL98 169 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 SPATS1Q496A3 300 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 GPAT3Q53EU6 434 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 ERICH5Q6P6B1 374 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 PTOV1Q86YD1 416 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 MICU2Q8IYU8 434 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 C11orf65Q8NCR3 313 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 NFKBIDQ8NI38 313 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 THAP3Q8WTV1 239 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-203ENST00000377344 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 FIG4Q92562 907 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 PIK3R3Q92569 461 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 SLC35A4Q96G79 324 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 SPATA9Q9BWV2 254 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 SEMA4CQ9C0C4 833 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 PIGUQ9H490 435 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 Q9N2J8 555 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 EXD2Q9NVH0 621 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 P2RX2Q9UBL9 471 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 OR10H1Q9Y4A9 318 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 PCDHGB3Q9Y5G1 929 aa12.02□□□□□ -0.49
CBWD3-203ENST00000377344 CDC14CA4D256 554 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 SLC28A2O43868 658 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 STAMBPO95630 424 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 HTR1EP28566 365 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 RNF4P78317 190 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 CDK6Q00534 326 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 PSG6Q00889 435 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 BNIP2Q12982 314 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 SCARB2Q14108 478 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 TRIM25Q14258 630 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 EBPQ15125 230 aaKnown RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 SYPL1Q16563 259 aa12.01□□□□□ -0.49
CBWD3-203ENST00000377344 ZNF630Q2M218 657 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-203ENST00000377344 C1orf146Q5VVC0 180 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms