RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 SF3A3Q12874 501 aaKnown RBP eCLIP16.92■□□□□ 0.3
PBX3-202ENST00000373482 NNATQ16517 81 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 MAPKAPK3Q16644 382 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 VPS26BQ4G0F5 336 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 SPINK14Q6IE38 97 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 BHLHB9Q6PI77 547 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 ANKRD46Q86W74 232 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 OR56A1Q8NGH5 318 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 OR9I1Q8NGQ6 314 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 FAM120BQ96EK7 910 aaKnown RBP16.92■□□□□ 0.3
PBX3-202ENST00000373482 VSTM2LQ96N03 204 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 BTBD9Q96Q07 612 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 CXorf36Q9H7Y0 433 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 RMND5AQ9H871 391 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 TIMMDC1Q9NPL8 285 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 EQTNQ9NQ60 294 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 BTNL2Q9UIR0 455 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
PBX3-202ENST00000373482 CHD6Q8TD26 2715 aa16.92■□□□□ 0.3
PBX3-202ENST00000373482 ZNF354AO60765 605 aaPredicted RBP16.91■□□□□ 0.3
PBX3-202ENST00000373482 SCN2BO60939 215 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 SP1P08047 785 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 FBXO45P0C2W1 286 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 KRT20P35900 424 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 PRIM2P49643 509 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 PLCXD2Q0VAA5 305 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 TP53BP2Q13625 1128 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 SLC25A25Q6KCM7 469 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 RPUSD3Q6P087 351 aaKnown RBP16.91■□□□□ 0.3
PBX3-202ENST00000373482 ZCCHC12Q6PEW1 402 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 RTL4Q6ZR62 310 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 MSANTD1Q6ZTZ1 278 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 CPLX4Q7Z7G2 160 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 SLC44A2Q8IWA5 706 aaPredicted RBP16.91■□□□□ 0.3
PBX3-202ENST00000373482 ZNF843Q8N446 348 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 CDRT4Q8N9R6 151 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 GOLM1Q8NBJ4 401 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 FAM98AQ8NCA5 519 aaKnown RBP16.91■□□□□ 0.3
PBX3-202ENST00000373482 SPACA9Q96E40 222 aaPredicted RBP16.91■□□□□ 0.3
PBX3-202ENST00000373482 SGCZQ96LD1 299 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 CCDC115Q96NT0 180 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 PANX1Q96RD7 426 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 Q9N2J8 555 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 CCDC167Q9P0B6 97 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 LUZP4Q9P127 313 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 OR10H1Q9Y4A9 318 aa16.91■□□□□ 0.3
PBX3-202ENST00000373482 SPTA1P02549 2419 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 NCKAP5O14513 1909 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 GMNCA6NCL1 334 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 B8ZZF3 427 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 TP53I11O14683 189 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 TO15178 435 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 CT45A8P0DMV1 189 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 CT45A9P0DMV2 189 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 NAGAP17050 411 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 ABCD3P28288 659 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 SEC24CP53992 1094 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 CORO7P57737 925 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 PSG6Q00889 435 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 INAQ16352 499 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 ZNF791Q3KP31 576 aaPredicted RBP16.9■□□□□ 0.3
PBX3-202ENST00000373482 AGKQ53H12 422 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 CT45A2Q5DJT8 189 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 PRR22Q8IZ63 422 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 TRIML2Q8N7C3 387 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 FAM13CQ8NE31 585 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 OR5AK3PQ8NH89 298 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 SCMH1Q96GD3 660 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 KLHL1Q9NR64 748 aa16.9■□□□□ 0.3
PBX3-202ENST00000373482 FAF1Q9UNN5 650 aaPredicted RBP16.9■□□□□ 0.3
PBX3-202ENST00000373482 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
PBX3-202ENST00000373482 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 CCDC154A6NI56 674 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 TTLL8A6PVC2 850 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 NME6O75414 186 aaPredicted RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 SORBS2O94875 1100 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 ANP32DO95626 131 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 P04436 131 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 HMGN2P05204 90 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 KRT16P08779 473 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 UQCRC2P22695 453 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 ZFP36L2P47974 494 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 RPP38P78345 283 aaKnown RBP16.89■□□□□ 0.29
PBX3-202ENST00000373482 C19orf57Q0VDD7 668 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 NTRK2Q16620 822 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 TIGD2Q4W5G0 525 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 COLEC12Q5KU26 742 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 MFSD12Q6NUT3 480 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 LYPD8Q6UX82 237 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 GALNTL5Q7Z4T8 443 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 ZNF227Q86WZ6 799 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 ZGRF1Q86YA3 2104 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 Q8NA96 180 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 PSD4Q8NDX1 1056 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 C10orf82Q8WW14 230 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 SLC9A6Q92581 669 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 JADE3Q92613 823 aa16.89■□□□□ 0.29
PBX3-202ENST00000373482 OMA1Q96E52 524 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms