RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 NUP50Q9UKX7 468 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 RB1P06400 928 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 CXCL3P19876 107 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 BSGP35613 385 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 RAET1GQ6H3X3 334 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 TMEM65Q6PI78 240 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 OR2A12Q8NGT7 310 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 GSTK1Q9Y2Q3 226 aa16.51■□□□□ 0.23
CHUK-201ENST00000370397 MPC2O95563 127 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 ZNF250P15622 560 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 CFL1P23528 166 aaKnown RBP16.5■□□□□ 0.23
CHUK-201ENST00000370397 CLCNKAP51800 687 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 RAB25P57735 213 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 B3GLCTQ6Y288 498 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 NEIL3Q8TAT5 605 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 SIRT4Q9Y6E7 314 aaPredicted RBP16.5■□□□□ 0.23
CHUK-201ENST00000370397 UBXN7O94888 489 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 ALDH1A1P00352 501 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 PDGFAP04085 211 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 GALP22466 123 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 SMSP52788 366 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 LHFPL3Q86UP9 236 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 OR4F15Q8NGB8 312 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 SLC5A11Q8WWX8 675 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 TMEM159Q96B96 161 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 MRPL39Q9NYK5 338 aaKnown RBP16.5■□□□□ 0.23
CHUK-201ENST00000370397 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 C2orf92A0A1B0GVN3 265 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 RAF1P04049 648 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 ARHGAP15Q53QZ3 475 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 GPR139Q6DWJ6 353 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
CHUK-201ENST00000370397 HGDQ93099 445 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 TMED9Q9BVK6 235 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 CHST2Q9Y4C5 530 aa16.5■□□□□ 0.23
CHUK-201ENST00000370397 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 A0A087WUU8 490 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 RFX3P48380 749 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 SNAPC1Q16533 368 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 TPGS2Q68CL5 300 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 OR4Q3Q8NH05 313 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 CHFRQ96EP1 664 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 FOLH1BQ9HBA9 442 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 ASB6Q9NWX5 421 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 A0A0G2JK05 382 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 TSPAN11A1L157 253 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 POP4O95707 220 aaKnown RBP16.49■□□□□ 0.23
CHUK-201ENST00000370397 EIF4EP06730 217 aaKnown RBP16.49■□□□□ 0.23
CHUK-201ENST00000370397 NAGAP17050 411 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 VIPR1P32241 457 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 ACLYP53396 1101 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 Q6ZVU0 165 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 ZNF655Q8N720 491 aaPredicted RBP16.49■□□□□ 0.23
CHUK-201ENST00000370397 OR5M3Q8NGP4 307 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 EMC7Q9NPA0 242 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 MOSPD1Q9UJG1 213 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.49■□□□□ 0.23
CHUK-201ENST00000370397 SH3BP5O60239 455 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 SLC19A2O60779 497 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 ANKRD53Q8N9V6 530 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 OR5D16Q8NGK9 328 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 PRRC1Q96M27 445 aa16.49■□□□□ 0.23
CHUK-201ENST00000370397 CIB4A0PJX0 185 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 ANKDD1BA6NHY2 528 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 KLF4O43474 513 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 ATG13O75143 517 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SMIM11AP58511 58 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 ADAM15Q13444 863 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 NPAS4Q8IUM7 802 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 DBF4BQ8NFT6 615 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SMPDL3AQ92484 453 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 ZNF764Q96H86 408 aaPredicted RBP16.48■□□□□ 0.23
CHUK-201ENST00000370397 ZSCAN5AQ9BUG6 496 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 CUEDC1Q9NWM3 386 aaPredicted RBP16.48■□□□□ 0.23
CHUK-201ENST00000370397 MDC1Q14676 2089 aaKnown RBP16.48■□□□□ 0.23
CHUK-201ENST00000370397 HEATR5BQ9P2D3 2071 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SURF4O15260 269 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 OMPP47874 163 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 UBE3AQ05086 875 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SYTL3Q4VX76 610 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 BCL2L15Q5TBC7 163 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 GDPD4Q6W3E5 623 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 LSRQ86X29 649 aaPredicted RBP16.48■□□□□ 0.23
CHUK-201ENST00000370397 CMTM8Q8IZV2 173 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 GLYATL1Q969I3 302 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 CCDC120Q96HB5 630 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 NRTNQ99748 197 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SEC14L3Q9UDX4 400 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 TEKT2Q9UIF3 430 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 PHF11Q9UIL8 331 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 SPEF1Q9Y4P9 236 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 A0A0C4DFX4 3053 aa16.48■□□□□ 0.23
CHUK-201ENST00000370397 IRGMA1A4Y4 181 aa16.47■□□□□ 0.23
CHUK-201ENST00000370397 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
CHUK-201ENST00000370397 BNIP3LO60238 219 aa16.47■□□□□ 0.23
CHUK-201ENST00000370397 CTSLP07711 333 aa16.47■□□□□ 0.23
CHUK-201ENST00000370397 CHRM4P08173 479 aa16.47■□□□□ 0.23
CHUK-201ENST00000370397 CD8BP10966 210 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms