RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 MGAT4BQ9UQ53 548 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 LATO43561 262 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CCDC159P0C7I6 412 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 FPR1P21462 350 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 IRAK1P51617 712 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 PSMD7P51665 324 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 MCCD1P59942 119 aaPredicted RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 TARDBPQ13148 414 aaKnown RBP eCLIP7.8□□□□□ -1.16
SSR2-202ENST00000368311 ZNF829Q3KNS6 432 aaPredicted RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 TP53INP1Q96A56 240 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 TRAPPC9Q96Q05 1148 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 WDR83Q9BRX9 315 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 SLC6A17Q9H1V8 727 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 NANOGQ9H9S0 305 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 PARP14Q460N5 1801 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 ZNF860A6NHJ4 632 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 APOA1P02647 267 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 PROCP04070 461 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 CD68P34810 354 aaPredicted RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 APOBEC1P41238 236 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 STT3AP46977 705 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 IRF9Q00978 393 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CDC20Q12834 499 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 TRAP1Q12931 704 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 ARL6IP1Q15041 203 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 MLC1Q15049 377 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 RNPS1Q15287 305 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 RASSF6Q6ZTQ3 369 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 GID4Q8IVV7 300 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 ACOT12Q8WYK0 555 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 RBM4BQ9BQ04 359 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 RBM4Q9BWF3 364 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 ZNF160Q9HCG1 818 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 TAS2R10Q9NYW0 307 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CIDEBQ9UHD4 219 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 IKZF2Q9UKS7 526 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 RBM7Q9Y580 266 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 NKX6-3A6NJ46 265 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 C12orf71A8MTZ7 269 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 ZNF587BE7ETH6 402 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CLIC1O00299 241 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 RTCAO00442 366 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 CREG1O75629 220 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 GADD45GO95257 159 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 OR12D1P0DN82 309 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 PPP3CBP16298 524 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CLDN8P56748 225 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CWF19L1Q69YN2 538 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 DEFB107AQ8IZN7 70 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 ANKK1Q8NFD2 765 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 PROKR2Q8NFJ6 384 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 STEAP2Q8NFT2 490 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 ADAMTS16Q8TE57 1224 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 GIPC3Q8TF64 312 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 RND1Q92730 232 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 HPS1Q92902 700 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CTRCQ99895 268 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 BTBD10Q9BSF8 475 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 QPCTLQ9NXS2 382 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 CAB39Q9Y376 341 aaPredicted RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 TIMM22Q9Y584 194 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 AP4S1Q9Y587 144 aa7.8□□□□□ -1.16
SSR2-202ENST00000368311 POLR2AP24928 1970 aaKnown RBP7.8□□□□□ -1.16
SSR2-202ENST00000368311 COL4A6Q14031 1691 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 A0A1B0GVI7 797 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 CENPXA8MT69 81 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 SAP18O00422 153 aaKnown RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 DPP4P27487 766 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 FAM174BQ3ZCQ3 159 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 RHBDD2Q6NTF9 364 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 ZNF585AQ6P3V2 769 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 FBXL14Q8N1E6 418 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 ZBTB44Q8NCP5 570 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 INTS12Q96CB8 462 aaKnown RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 GATA5Q9BWX5 397 aaPredicted RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 ESRP2Q9H6T0 727 aaKnown RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 REXO2Q9Y3B8 237 aaKnown RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 PCDHA9Q9Y5H5 950 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 PLXNA1Q9UIW2 1896 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 HAT1O14929 419 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 ZNF821O75541 412 aaPredicted RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 ZGLP1P0C6A0 271 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 FCARP24071 287 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 DCKP27707 260 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 GRIA3P42263 894 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 GDI2P50395 445 aaKnown RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 SCRN3Q0VDG4 424 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 SLC10A2Q12908 348 aaPredicted RBP7.79□□□□□ -1.16
SSR2-202ENST00000368311 ARMC4Q5T2S8 1044 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 GALNT5Q7Z7M9 940 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 SLC35F3Q8IY50 421 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 D2HGDHQ8N465 521 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 BANPQ8N9N5 519 aa7.79□□□□□ -1.16
SSR2-202ENST00000368311 CCDC54Q8NEL0 328 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms