RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PCDHA9Q9Y5H5 950 aa19.16■□□□□ 0.66
CD47-202ENST00000361309 RTTNQ86VV8 2226 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 HMX2A2RU54 273 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 GOLGA6L10A6NI86 522 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 FAM171A2A8MVW0 826 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 PLOD2O00469 737 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 ACOX3O15254 700 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 CBX7O95931 251 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 ATP1B1P05026 303 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 DEKP35659 375 aaKnown RBP19.15■□□□□ 0.66
CD47-202ENST00000361309 LHX2P50458 406 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 CCNG1P51959 295 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 MAPK12P53778 367 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 PLTPP55058 493 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 GAB1Q13480 694 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 TTC19Q6DKK2 380 aaPredicted RBP19.15■□□□□ 0.66
CD47-202ENST00000361309 METTL2BQ6P1Q9 378 aaKnown RBP19.15■□□□□ 0.66
CD47-202ENST00000361309 KLC3Q6P597 504 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 GRAMD2AQ8IUY3 354 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 CIARTQ8N365 385 aaPredicted RBP19.15■□□□□ 0.66
CD47-202ENST00000361309 METTL4Q8N3J2 472 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 OR52R1Q8NGF1 315 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 ZNF592Q92610 1267 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 CTHRC1Q96CG8 243 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 C6orf203Q9P0P8 240 aaPredicted RBP19.15■□□□□ 0.66
CD47-202ENST00000361309 PACSIN3Q9UKS6 424 aa19.15■□□□□ 0.66
CD47-202ENST00000361309 CSPG4Q6UVK1 2322 aa19.14■□□□□ 0.66
CD47-202ENST00000361309 FBN3Q75N90 2809 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 A0A096LPK6 155 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 C1orf226A1L170 272 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 SMPD2O60906 423 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 TNFSF13O75888 250 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 CSNK2A2P19784 350 aaPredicted RBP19.14■□□□□ 0.65
CD47-202ENST00000361309 CHMP24386 653 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 EEF1A1P68104 462 aaKnown RBP19.14■□□□□ 0.65
CD47-202ENST00000361309 HMGCS1Q01581 520 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 DUSP2Q05923 314 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 TRMT12Q53H54 448 aaKnown RBP19.14■□□□□ 0.65
CD47-202ENST00000361309 EEF1A1P5Q5VTE0 462 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 SCIMPQ6UWF3 145 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 PLCZ1Q86YW0 608 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 PTGR2Q8N8N7 351 aaPredicted RBP19.14■□□□□ 0.65
CD47-202ENST00000361309 FBXO25Q8TCJ0 367 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 NUDT8Q8WV74 236 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 PHF21BQ96EK2 531 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 COX4I2Q96KJ9 171 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 NTMT1Q9BV86 223 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 FBXL2Q9UKC9 423 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 ROS1P08922 2347 aa19.14■□□□□ 0.65
CD47-202ENST00000361309 RAI1Q7Z5J4 1906 aaPredicted RBP19.13■□□□□ 0.65
CD47-202ENST00000361309 A0A1W2PNV4 684 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 H7C1Q1 480 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 SIAH2O43255 324 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 GUCY1B2O75343 617 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 TGM6O95932 706 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 DRD5P21918 477 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 SRD5A2P31213 254 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 PPICP45877 212 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 EMDP50402 254 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 CLDN18P56856 261 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 FAM27E3Q08E93 113 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 IFT88Q13099 833 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 LTB4RQ15722 352 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 SGO1Q5FBB7 561 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 TECRLQ5HYJ1 363 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 FAM180BQ6P0A1 224 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 AAGABQ6PD74 315 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 COMMD6Q7Z4G1 85 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 LRRC75A-AS1Q8N1F1 130 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 TRPC4APQ8TEL6 797 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 TMBIM1Q969X1 311 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 KLHL29Q96CT2 875 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 SFXN2Q96NB2 322 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 NSUN5Q96P11 429 aaKnown RBP19.13■□□□□ 0.65
CD47-202ENST00000361309 COL21A1Q96P44 957 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 PIP5K1AQ99755 562 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 PRODH2Q9UF12 536 aa19.13■□□□□ 0.65
CD47-202ENST00000361309 HIVEP2P31629 2446 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 TO15178 435 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 CTIFO43310 598 aaKnown RBP19.12■□□□□ 0.65
CD47-202ENST00000361309 REM1O75628 298 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 SMNDC1O75940 238 aaKnown RBP eCLIP19.12■□□□□ 0.65
CD47-202ENST00000361309 PCSK2P16519 638 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 TCEA1P23193 301 aaKnown RBP19.12■□□□□ 0.65
CD47-202ENST00000361309 CAV1Q03135 178 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 TRAF3Q13114 568 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 PRIMA1Q86XR5 153 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 PLD6Q8N2A8 252 aaKnown RBP19.12■□□□□ 0.65
CD47-202ENST00000361309 SPATA4Q8NEY3 305 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 PIGTQ969N2 578 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 TM4SF18Q96CE8 201 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 TMCO6Q96DC7 493 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 Q96MF0 132 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 WFIKKN1Q96NZ8 548 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 ZBTB26Q9HCK0 441 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 FARSBQ9NSD9 589 aaKnown RBP19.12■□□□□ 0.65
CD47-202ENST00000361309 KLHL28Q9NXS3 571 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 PCTPQ9UKL6 214 aa19.12■□□□□ 0.65
CD47-202ENST00000361309 SLC12A4Q9UP95 1085 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms