RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 EPHA4P54764 986 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 HBA1P69905 142 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 ZXDCQ2QGD7 858 aaPredicted RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 PLPP4Q5VZY2 271 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 RAET1GQ6H3X3 334 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 KIAA1211LQ6NV74 962 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 UNC5DQ6UXZ4 953 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 PRICKLE2Q7Z3G6 844 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 RASGRP3Q8IV61 690 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 OR5M3Q8NGP4 307 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 MARC2Q969Z3 335 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 PDXPQ96GD0 296 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 MTERF1Q99551 399 aaKnown RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 DPYSL5Q9BPU6 564 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 C19orf43Q9BQ61 176 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 TMEM168Q9H0V1 697 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 LDAHQ9H6V9 325 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 BRF2Q9HAW0 419 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 BAIAP2Q9UQB8 552 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 CLCA2Q9UQC9 943 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 ZFP37Q9Y6Q3 630 aaPredicted RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 HIDE1A8MVS5 230 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 GPR171O14626 319 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 ITPKAP23677 461 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 CBX5P45973 191 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 LIM2P55344 173 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 RAG2P55895 527 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 SMIM11AP58511 58 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 SEC23BQ15437 767 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 GPR33Q49SQ1 333 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 TCEAL5Q5H9L2 206 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 PGBD2Q6P3X8 592 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 ARIH2OSQ8N7S6 290 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 ADAMTS19Q8TE59 1207 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 SMG7Q92540 1137 aaKnown RBP14.09□□□□□ -0.15
UBAP1-202ENST00000359544 WBP1Q96G27 269 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 OR4K3Q96R72 315 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 REG4Q9BYZ8 158 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 CYSLTR2Q9NS75 346 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 KCMF1Q9P0J7 381 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 HRH3Q9Y5N1 445 aa14.09□□□□□ -0.15
UBAP1-202ENST00000359544 LRRTM2O43300 516 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 PI15O43692 258 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 PRAMEF12O95522 483 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 RECKO95980 971 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 TCRBP04435 133 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 H1F0P07305 194 aaKnown RBP14.08□□□□□ -0.15
UBAP1-202ENST00000359544 LCN1P31025 176 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 RAE1P78406 368 aaKnown RBP14.08□□□□□ -0.15
UBAP1-202ENST00000359544 TFF2Q03403 129 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 ZMYND11Q15326 602 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.15
UBAP1-202ENST00000359544 DNAJB7Q7Z6W7 309 aaPredicted RBP14.08□□□□□ -0.15
UBAP1-202ENST00000359544 ADAMTS14Q8WXS8 1223 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 RNFT2Q96EX2 444 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 UROC1Q96N76 676 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 RNF32Q9H0A6 362 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 ZFYVE1Q9HBF4 777 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 IMP3Q9NV31 184 aaKnown RBP14.08□□□□□ -0.15
UBAP1-202ENST00000359544 MARCH5Q9NX47 278 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 HCN3Q9P1Z3 774 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 CBLCQ9ULV8 474 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 MAP4K5Q9Y4K4 846 aa14.08□□□□□ -0.15
UBAP1-202ENST00000359544 GABRPO00591 440 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 PRODHO43272 600 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 CHST10O43529 356 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 CLDN11O75508 207 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 SNAPC5O75971 98 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 C6orf47O95873 294 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 NSG1P42857 185 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 RFX3P48380 749 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 GAS1P54826 345 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 TAP2Q03519 686 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 SP140Q13342 867 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 ASPGQ86U10 573 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 IQCF1Q8N6M8 205 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 UXS1Q8NBZ7 420 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 SKA2Q8WVK7 121 aaPredicted RBP14.08□□□□□ -0.16
UBAP1-202ENST00000359544 MRPL38Q96DV4 380 aaKnown RBP14.08□□□□□ -0.16
UBAP1-202ENST00000359544 IGSF21Q96ID5 467 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 PELOQ9BRX2 385 aaKnown RBP14.08□□□□□ -0.16
UBAP1-202ENST00000359544 WRAP53Q9BUR4 548 aaKnown RBP14.08□□□□□ -0.16
UBAP1-202ENST00000359544 ZNF436Q9C0F3 470 aaPredicted RBP14.08□□□□□ -0.16
UBAP1-202ENST00000359544 OSGEPL1Q9H4B0 414 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 TRPM5Q9NZQ8 1165 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 PCDHB8Q9UN66 801 aa14.08□□□□□ -0.16
UBAP1-202ENST00000359544 GNG14A0A1W2PPG7 69 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 LINC01565O15544 149 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 LANCL1O43813 399 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ACSL4O60488 711 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 RB1P06400 928 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ALPIP09923 528 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 RAB3AP20336 220 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 ACSL1P33121 698 aa14.07□□□□□ -0.16
UBAP1-202ENST00000359544 PITPNBP48739 271 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms