RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 IL32P24001 234 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 DNASE1P24855 282 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 CD70P32970 193 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 BUD31P41223 144 aaPredicted RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 CTSOP43234 321 aaPredicted RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 SRP9P49458 86 aaKnown RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 CTSCP53634 463 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 PNLIPRP1P54315 467 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 ELAVL2Q12926 359 aaKnown RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 EXOSC2Q13868 293 aaKnown RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 TAF1CQ15572 869 aaPredicted RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 KCNA10Q16322 511 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 DUSP6Q16828 381 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 CCNJQ5T5M9 372 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 BHLHB9Q6PI77 547 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 BRAT1Q6PJG6 821 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 CD200R1LQ6Q8B3 271 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 TMEM107Q6UX40 140 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 TRILQ7L0X0 811 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 OLIG3Q7RTU3 272 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 KLBQ86Z14 1044 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 PIAS4Q8N2W9 510 aaPredicted RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 KLHL36Q8N4N3 616 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 ARL14EPQ8N8R7 260 aaPredicted RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 ZNF740Q8NDX6 193 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 CEP76Q8TAP6 659 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 ZNF480Q8WV37 535 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 OVCA2Q8WZ82 227 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 SECISBP2Q96T21 854 aaKnown RBP7.25□□□□□ -1.25
CD46-204ENST00000357714 CDCP1Q9H5V8 836 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 EMC7Q9NPA0 242 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 ZFP64Q9NPA5 681 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 RDH8Q9NYR8 311 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 CLEC4AQ9UMR7 237 aa7.25□□□□□ -1.25
CD46-204ENST00000357714 RFXAPO00287 272 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 RTCAO00442 366 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 MMP20O60882 483 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 MTRF1O75570 445 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 ALDH1A1P00352 501 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 C1GALT1C1LP0DN25 315 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 PDHA2P29803 388 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 ACSL1P33121 698 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SLC6A11P48066 632 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 RPL6Q02878 288 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 RIN1Q13671 783 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 DSG2Q14126 1118 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 MFSD13AQ14CX5 517 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SYPL1Q16563 259 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 AANATQ16613 207 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 ZSWIM7Q19AV6 140 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 PLA1AQ53H76 456 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SLC25A30Q5SVS4 291 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 FAM122CQ6P4D5 195 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 TMEM65Q6PI78 240 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 TECPR1Q7Z6L1 1165 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 BEST4Q8NFU0 473 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SPRYD4Q8WW59 207 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 EXOSC8Q96B26 276 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 ECHDC3Q96DC8 303 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 NEURL3Q96EH8 262 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SMAD5Q99717 465 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 TREX2Q9BQ50 279 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 RSPO3Q9BXY4 272 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 BEX1Q9HBH7 125 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 A4GALTQ9NPC4 353 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 A4GNTQ9UNA3 340 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SH2B3Q9UQQ2 575 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 A0A1W2PRQ8 180 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 FOXE1O00358 373 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 DVL2O14641 736 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 ZNF821O75541 412 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 GSTM3P21266 225 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 SDHBP21912 280 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 PPP2R1BP30154 601 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 CCND3P30281 292 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 GAS1P54826 345 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 CDK5Q00535 292 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 TAP2Q03519 686 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 CHMP1BQ7LBR1 199 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 C2orf73Q8N5S3 287 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 ACOT12Q8WYK0 555 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 TMEM169Q96HH4 297 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 C12orf66Q96MD2 445 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 RIOK2Q9BVS4 552 aaKnown RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 SPRTNQ9H040 489 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 BTBD1Q9H0C5 482 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 KCNK12Q9HB15 430 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 KLHL1Q9NR64 748 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 CNIH4Q9P003 139 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 H2AFY2Q9P0M6 372 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 EFCAB14O75071 495 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 ATG13O75143 517 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 URODP06132 367 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 NPPBP16860 134 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 GIFP27352 417 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 PITPNBP48739 271 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 PRKAG1P54619 331 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 VSX2P58304 361 aaPredicted RBP7.24□□□□□ -1.25
CD46-204ENST00000357714 TXNDC8Q6A555 127 aa7.24□□□□□ -1.25
CD46-204ENST00000357714 GPR139Q6DWJ6 353 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms