RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SLC44A2Q8IWA5 706 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LAS2Q8IYD9 372 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FBXL6Q8N531 539 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 SLC5A11Q8WWX8 675 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TMCO6Q96DC7 493 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 WDR34Q96EX3 536 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 ST6GAL2Q96JF0 529 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 SLC25A19Q9HC21 320 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 C11orf16Q9NQ32 467 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 RAB23Q9ULC3 237 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 MAPRE3Q9UPY8 281 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LSM2Q9Y333 95 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 ENPP4Q9Y6X5 453 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 RP1P56715 2156 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TRBC2A0A5B9 178 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PIPSLA2A3N6 862 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FAM172BPA6NC97 362 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 WWP2O00308 870 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TNFRSF10CO14798 259 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PPM1DO15297 605 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 MPZL2O60487 215 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 SEMA7AO75326 666 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 CSO75390 466 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 UGT2B17O75795 530 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 KRT75O95678 551 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TGFB1P01137 390 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 STATHP02808 62 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FURINP09958 794 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 RHCEP18577 417 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 AZGP1P25311 298 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 CRYBB2P43320 205 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 MAPK9P45984 424 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LIM2P55344 173 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LRRC74AQ0VAA2 488 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 SRSF5Q13243 272 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TRIM40Q6P9F5 258 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF517Q6ZMY9 492 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 VASH1Q7L8A9 365 aaPredicted RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 NANOGNBQ7Z5D8 188 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 FAM46DQ8NEK8 389 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 OR4E2Q8NGC2 313 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 LILRB4Q8NHJ6 448 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 GPBAR1Q8TDU6 330 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 CXorf40BQ96DE9 158 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 NELL2Q99435 816 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 MACROD1Q9BQ69 325 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 SORBS1Q9BX66 1292 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 NDEL1Q9GZM8 345 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 AICDAQ9GZX7 198 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 OR51B5Q9H339 312 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 DDX28Q9NUL7 540 aaKnown RBP8.1□□□□□ -1.11
TRIM55-204ENST00000353317 PCOLCE2Q9UKZ9 415 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 DSPPQ9NZW4 1301 aa8.1□□□□□ -1.11
TRIM55-204ENST00000353317 TRBV4-1A0A0J9YWV2 114 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 LINC00854A0A1B0GVQ3 168 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ANKRD34BA5PLL1 514 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 BTN3A3O00478 584 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 GPR37L1O60883 481 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF217O75362 1048 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SOX14O95416 240 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 HBQ1P09105 142 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PIPP12273 146 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 CXCR2P25025 360 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PKLRP30613 574 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 CHI3L1P36222 383 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RABIFP47224 123 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RHAGQ02094 409 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SLAMF1Q13291 335 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 MED27Q6P2C8 311 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 LCTLQ6UWM7 567 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 BCDIN3DQ7Z5W3 292 aaKnown RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF761Q86XN6 746 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SLC34A3Q8N130 599 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 GJD3Q8N144 294 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 WDR48Q8TAF3 677 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SETD6Q8TBK2 473 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SNX18Q96RF0 628 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RSPO3Q9BXY4 272 aaPredicted RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 TIGARQ9NQ88 270 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 SNTG1Q9NSN8 517 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 DNAJC27Q9NZQ0 273 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ENOPH1Q9UHY7 261 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 KCND3Q9UK17 655 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PCDHGB2Q9Y5G2 931 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 UNC13CQ8NB66 2214 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ADAMTS9Q9P2N4 1935 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ARRDC5A6NEK1 342 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 IFNW1P05000 195 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 ARAFP10398 606 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 IL7P13232 177 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 PSMA1P25786 263 aaKnown RBP8.09□□□□□ -1.11
TRIM55-204ENST00000353317 CXCL12P48061 93 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RAB28P51157 221 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 TAS2R50P59544 299 aa8.09□□□□□ -1.11
TRIM55-204ENST00000353317 RPL6Q02878 288 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms