RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 A4GNTQ9UNA3 340 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CHST2Q9Y4C5 530 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 PCDHGA6Q9Y5G7 932 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 GMPPBQ9Y5P6 360 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 CSNK1G3Q9Y6M4 447 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SPACA6W5XKT8 324 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 DNAH14Q0VDD8 3507 aa6.48□□□□□ -1.37
TRIM55-203ENST00000350034 SNRNP200O75643 2136 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FANCMQ8IYD8 2048 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 BLACEA4D250 179 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 TLCD2A6NGC4 264 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FAM227AF5H4B4 570 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SGK494L7N484 410 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 M0R3H8 397 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FAAHO00519 579 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 BCAT2O15382 392 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CHST10O43529 356 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 KIF1CO43896 1103 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PCDHGA12O60330 932 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RDH16O75452 317 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SEC14L2O76054 403 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ANGPTL1O95841 491 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GASTP01350 101 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GUSBP08236 651 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC35E2P0CK97 266 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GIMD1P0DJR0 217 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ACP2P11117 423 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CYP4B1P13584 511 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ITIH1P19827 911 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PCMT1P22061 227 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RPS4Y1P22090 263 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ELAVL4P26378 380 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ACVR2AP27037 513 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DCKP27707 260 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PRKAR1BP31321 381 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC5A2P31639 672 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CSNK1EP49674 416 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MAPK10P53779 464 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ESRRGP62508 458 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC35A2P78381 396 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SHC2P98077 582 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 IL5RAQ01344 420 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CHRNEQ04844 493 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DMWDQ09019 674 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MAP4K2Q12851 820 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FAM53BQ14153 422 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GANABQ14697 944 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RAB39AQ14964 217 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 NR1D2Q14995 579 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SEC23BQ15437 767 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SHBQ15464 509 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 NPTX1Q15818 432 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DUSP5Q16690 384 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 NDUFA9Q16795 377 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PRICKLE4Q2TBC4 344 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PROX2Q3B8N5 592 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ARHGAP11BQ3KRB8 267 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 TRMT12Q53H54 448 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ATAD3BQ5T9A4 648 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CD300LDQ6UXZ3 194 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 B3GNT6Q6ZMB0 384 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 FRRS1Q6ZNA5 592 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MED25Q71SY5 747 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SZRD1Q7Z422 152 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GPR141Q7Z602 305 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RBM45Q8IUH3 476 aaKnown RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ENTHD1Q8IYW4 607 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 GALNT15Q8N3T1 639 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 AQP11Q8NBQ7 271 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC16A11Q8NCK7 471 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SIMC1Q8NDZ2 872 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OR9Q2Q8NGE9 314 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OR6T1Q8NGN1 323 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OR13F1Q8NGS4 319 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OR9A4Q8NGU2 314 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OR52J3Q8NH60 311 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 RHOXF1Q8NHV9 184 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CNIH3Q8TBE1 160 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ADAMTS15Q8TE58 950 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ADAMTS18Q8TE60 1221 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ZFAND2BQ8WV99 257 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 APH1BQ8WW43 257 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 NR4A3Q92570 626 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 OTUB1Q96FW1 271 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PRRC1Q96M27 445 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 STACQ99469 402 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SLC38A3Q99624 504 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 CCDC3Q9BQI4 270 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DGCR6LQ9BY27 220 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ZNF350Q9GZX5 532 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 SAP130Q9H0E3 1048 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ANKRA2Q9H9E1 313 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 ANKHQ9HCJ1 492 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 DUSP22Q9NRW4 184 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 STARD5Q9NSY2 213 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 MAN2C1Q9NTJ4 1040 aa6.47□□□□□ -1.37
TRIM55-203ENST00000350034 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms