RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CFL2Q9Y281 166 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 GPR55Q9Y2T6 319 aaPredicted RBP13.22□□□□□ -0.29
HMGN3-202ENST00000344726 DNAJC15Q9Y5T4 150 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 OTOGQ6ZRI0 2925 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CAPN14A8MX76 684 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 ESPNB1AK53 854 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 AQP7O14520 342 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 TO15178 435 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 TYROBPO43914 113 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 SUSD5O60279 629 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 NPHS1O60500 1241 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 SEC22BO75396 215 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CT45A8P0DMV1 189 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CT45A9P0DMV2 189 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 COX6B1P14854 86 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 DRD5P21918 477 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 PTGDSP41222 190 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 PPICP45877 212 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 MAN2A2P49641 1150 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CORO7P57737 925 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 NUP107P57740 925 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF844Q08AG5 666 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 UGT3A2Q3SY77 523 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CT45A2Q5DJT8 189 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 ARL13AQ5H913 290 aaPredicted RBP13.21□□□□□ -0.29
HMGN3-202ENST00000344726 TBCELQ5QJ74 424 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 CCDC71Q8IV32 467 aaPredicted RBP13.21□□□□□ -0.29
HMGN3-202ENST00000344726 SAMD14Q8IZD0 417 aaPredicted RBP13.21□□□□□ -0.29
HMGN3-202ENST00000344726 FAM9CQ8IZT9 166 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 OMA1Q96E52 524 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 HSPBAP1Q96EW2 488 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 FCRL1Q96LA6 429 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF597Q96LX8 424 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 VSTM2LQ96N03 204 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 BBS4Q96RK4 519 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
HMGN3-202ENST00000344726 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 LDAHQ9H6V9 325 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 LRTM1Q9HBL6 345 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 C1orf109Q9NX04 203 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 TAS2R7Q9NYW3 318 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 PRODH2Q9UF12 536 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 RNF6Q9Y252 685 aa13.21□□□□□ -0.29
HMGN3-202ENST00000344726 AKAP9Q99996 3911 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 TRGV5A0A0B4J1U4 118 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 NKX2-6A6NCS4 301 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 SLC28A1O00337 649 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 ACOX3O15254 700 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 PLOD3O60568 738 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 HCN1O60741 890 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 UGT2B11O75310 529 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 JUNP05412 331 aaKnown RBP13.2□□□□□ -0.3
HMGN3-202ENST00000344726 FGF4P08620 206 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 LINC00032P0C843 101 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 NAGAP17050 411 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 MPIP34949 423 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 PTGER4P35408 488 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 ETV4P43268 484 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 TRPC1P48995 793 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 DCAF7P61962 342 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 TFF3Q07654 80 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 PLCXD2Q0VAA5 305 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 KRT71Q3SY84 523 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 CES4AQ5XG92 561 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 TMEM198Q66K66 360 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
HMGN3-202ENST00000344726 ZBTB9Q96C00 473 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 ERP27Q96DN0 273 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 BTBD9Q96Q07 612 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 TREX2Q9BQ50 279 aaPredicted RBP13.2□□□□□ -0.3
HMGN3-202ENST00000344726 UCK2Q9BZX2 261 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 UBQLN3Q9H347 655 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 GLIPR2Q9H4G4 154 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 FOLH1BQ9HBA9 442 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 ACKR4Q9NPB9 350 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
HMGN3-202ENST00000344726 QPCTLQ9NXS2 382 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 RAB21Q9UL25 225 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 POLQO75417 2590 aa13.2□□□□□ -0.3
HMGN3-202ENST00000344726 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 BCKDKO14874 412 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
HMGN3-202ENST00000344726 RGS14O43566 566 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 BCAS2O75934 225 aaPredicted RBP13.19□□□□□ -0.3
HMGN3-202ENST00000344726 SNX4O95219 450 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 SDC1P18827 310 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 GDF1P27539 372 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 MC3RP41968 323 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 NCBP2P52298 156 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMGN3-202ENST00000344726 KRTAP10-9P60411 292 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 PMPCAQ10713 525 aa13.19□□□□□ -0.3
HMGN3-202ENST00000344726 RFTN2Q52LD8 501 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms