RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 C21orf58P58505 322 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 KIAA1024LP59773 190 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 AP3S2P59780 193 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZP1P60852 638 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SEC61A1P61619 476 aaKnown RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 HMGCS1Q01581 520 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ACSM1Q08AH1 577 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 MAP2K5Q13163 448 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SNTB1Q13884 538 aaKnown RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 DOC2BQ14184 412 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PTPRCAPQ14761 206 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SHHQ15465 462 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 AMHR2Q16671 573 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PTPRNQ16849 979 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 CDNFQ49AH0 187 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ANXA8L1Q5VT79 327 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 DHRS7BQ6IAN0 325 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 LIN54Q6MZP7 749 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ATRAIDQ6UW56 229 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 LYPD4Q6UWN0 246 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ALKAL2Q6UX46 152 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF621Q6ZSS3 439 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 CLEC20AQ6ZU45 233 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 BEND4Q6ZU67 534 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 HFE2Q6ZVN8 426 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF551Q7Z340 670 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 MARCH9Q86YJ5 346 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 FAM26EQ8N5C1 309 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TOP6BLQ8N6T0 577 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 OR8J2Q8NGG1 315 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 OR52I1Q8NGK6 324 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 CD200R1Q8TD46 325 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 NUDT8Q8WV74 236 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 EDEM1Q92611 657 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM203Q969S6 136 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TADA1Q96BN2 335 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PPP1R16BQ96T49 567 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SEMA4CQ9C0C4 833 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TINAGL1Q9GZM7 467 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 C20orf85Q9H1P6 137 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SLAMF7Q9NQ25 335 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SEMA3GQ9NS98 782 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 WWOXQ9NZC7 414 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 UXTQ9UBK9 157 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF282Q9UDV7 671 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZMYM5Q9UJ78 669 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ACSL6Q9UKU0 697 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PCOLCE2Q9UKZ9 415 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 MED16Q9Y2X0 877 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 OARD1Q9Y530 152 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PHIPQ8WWQ0 1821 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TCRBV16S1A1N1A0A5B0 115 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PMS2P1A4D2B8 440 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 YJEFN3A6XGL0 299 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 NUDT19A8MXV4 375 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 LRRN3E7EW58 273 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CCL22O00626 93 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 STX11O75558 287 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EIF3GO75821 320 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TOXO94900 526 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 UBL3O95164 117 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 IFNW1P05000 195 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EPB42P16452 691 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ARF4P18085 180 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SDC1P18827 310 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CXCL2P19875 107 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ITGB8P26012 769 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 DDX6P26196 483 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GIFP27352 417 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FLT3LGP49771 235 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 MMP15P51511 669 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 XKP51811 444 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SMIM11AP58511 58 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FABP5Q01469 135 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 RELQ04864 619 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZSWIM7Q19AV6 140 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GGTA1PQ4G0N0 100 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PAN3Q58A45 887 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 RAB41Q5JT25 222 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 KIAA1161Q6NSJ0 714 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EFCAB12Q6NXP0 572 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM91Q6ZNR0 172 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TMUB2Q71RG4 321 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 OR6V1Q8N148 313 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SYT14Q8NB59 555 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 OR52J3Q8NH60 311 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EEF1AKMT1Q8WVE0 214 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 NDRG1Q92597 394 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 HLA-CQ95604 372 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 IL4I1Q96RQ9 567 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FAM126AQ9BYI3 521 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 BCL2L14Q9BZR8 327 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CHST8Q9H2A9 424 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 LRRN3Q9H3W5 708 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF768Q9H5H4 540 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TPT1P8Q9HAU6 139 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 NIT2Q9NQR4 276 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms