RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GPR171O14626 319 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 PRRG1O14668 218 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TBX19O60806 448 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 IGSF6O95976 241 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 CFDP00746 253 aaPredicted RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TCRBP04435 133 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 PEPDP12955 493 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ICAM2P13598 275 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 NPR2P20594 1047 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 MMP12P39900 470 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ZNF81P51508 661 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TAS2R50P59544 299 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 MAP4K2Q12851 820 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 CXCL17Q6UXB2 119 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 C16orf62Q7Z3J2 963 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 CMIPQ8IY22 773 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 SLC43A3Q8NBI5 491 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ASZ1Q8WWH4 475 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ADAMTS14Q8WXS8 1223 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 MED8Q96G25 268 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 C2orf49Q9BVC5 232 aaPredicted RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TMED9Q9BVK6 235 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 GPR62Q9BZJ7 368 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 PLA2G12AQ9BZM1 189 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 BTBD1Q9H0C5 482 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 SCML1Q9UN30 329 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 A0A1W2PPL8 197 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 hCG_1807616A0A1W2PRN6 198 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 A8MUA0 341 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 A8MX80 341 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TOR1AO14656 332 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 DUSP11O75319 330 aaKnown RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 EIF4EP06730 217 aaKnown RBP9.11□□□□□ -0.95
HOXA1-201ENST00000343060 UGT2B7P16662 529 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 DNASE1P24855 282 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 PITPNBP48739 271 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 DHODHQ02127 395 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 FZD5Q13467 585 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 GSG1Q2KHT4 349 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ARSKQ6UWY0 536 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 ASB18Q6ZVZ8 466 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 KLHL36Q8N4N3 616 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 UXS1Q8NBZ7 420 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 OR2T4Q8NH00 348 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 CEP76Q8TAP6 659 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 NEIL2Q969S2 332 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 EFCAB11Q9BUY7 163 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 SLC6A16Q9GZN6 736 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 KCNMB2Q9Y691 235 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 PLXNA2O75051 1894 aa9.11□□□□□ -0.95
HOXA1-201ENST00000343060 TRAV6A0A075B6T7 132 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SERPINI2O75830 405 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SOX30O94993 753 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLC16A8O95907 504 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CATP04040 527 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 GBAP04062 536 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 RB1P06400 928 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 IL3P08700 152 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 ACSM4P0C7M7 580 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 IRF1P10914 325 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SPINT3P49223 89 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 DCDC1P59894 354 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 RAB14P61106 215 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 INSL4Q14641 139 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CCSMST1Q4G0I0 132 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 PYHIN1Q6K0P9 492 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SLC27A4Q6P1M0 643 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 OVCH2Q7RTZ1 564 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TMPRSS11BQ86T26 416 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 RTN4RL1Q86UN2 441 aaPredicted RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 IQCHQ86VS3 1027 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 COMTD1Q86VU5 262 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 APCDD1Q8J025 514 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TBC1D19Q8N5T2 526 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 MS4A15Q8N5U1 240 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 OR8D4Q8NGM9 314 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 OR10Z1Q8NGY1 313 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 OR5P2Q8WZ92 322 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 ASIC4Q96FT7 647 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM169Q96HH4 297 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 PPP1R16AQ96I34 528 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 PRRC1Q96M27 445 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 C7orf50Q9BRJ6 194 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TMEM175Q9BSA9 504 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SAP130Q9H0E3 1048 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SHARPINQ9H0F6 387 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 SMG9Q9H0W8 520 aaKnown RBP9.1□□□□□ -0.95
HOXA1-201ENST00000343060 TBC1D17Q9HA65 648 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 C2orf92A0A1B0GVN3 265 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 MFSD2BA6NFX1 497 aa9.1□□□□□ -0.95
HOXA1-201ENST00000343060 CD8B2A6NJW9 211 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms