RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 CTU2Q2VPK5 515 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF782Q6ZMW2 699 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SHFQ7M4L6 423 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TFAP2DQ7Z6R9 452 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MFSD9Q8NBP5 474 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 BRIX1Q8TDN6 353 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 EDEM1Q92611 657 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MTFMTQ96DP5 389 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR52E6Q96RD3 313 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DPCDQ9BVM2 203 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MROQ9BYG7 248 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CD244Q9BZW8 370 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KCNJ16Q9NPI9 418 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CCDC167Q9P0B6 97 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MYOTQ9UBF9 498 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FBXO5Q9UKT4 447 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PADI1Q9ULC6 663 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SNRNP200O75643 2136 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MYOCOSA0A1B0GUC4 107 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PP18 115 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AIPO00170 330 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ENPP3O14638 875 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FFAR3O14843 346 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC25A17O43808 307 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NCR1O76036 304 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UBBP0CG47 229 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DRD2P14416 443 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IL1RNP18510 177 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AVPR2P30518 371 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RPL13AP40429 203 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SELPLGQ14242 412 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CYP1B1Q16678 543 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RNF212Q495C1 297 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF773Q6PK81 442 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF100Q8IYN0 542 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SPEM1Q8N4L4 309 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 APOBEC4Q8WW27 367 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF606Q8WXB4 792 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZBTB10Q96DT7 871 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 C16orf70Q9BSU1 422 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EBF2Q9HAK2 575 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NT5MQ9NPB1 228 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ASB6Q9NWX5 421 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 KLRF1Q9NZS2 232 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TP53BP1Q12888 1972 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TTC24A2A3L6 582 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 C4orf47A7E2U8 309 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IMPA2O14732 288 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TNFSF15O95150 251 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 F11P03951 625 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF182P17025 639 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CD86P42081 329 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TSFMP43897 325 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ASCL1P50553 236 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UBE2MP61081 183 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EEF1A1P68104 462 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC7A5Q01650 507 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EEF1A2Q05639 463 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GBX1Q14549 363 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RTL8BQ17RB0 113 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EEF1A1P5Q5VTE0 462 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AGAP7PQ5VUJ5 663 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 KIAA1614Q5VZ46 1190 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR52E8Q6IFG1 317 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF621Q6ZSS3 439 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LANCL3Q6ZV70 420 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IQCHQ86VS3 1027 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 COMTD1Q86VU5 262 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MRPL43Q8N983 215 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NEK7Q8TDX7 302 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF384Q8TF68 577 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CMTM3Q96MX0 182 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AGAP4Q96P64 663 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DUSP9Q99956 384 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FUNDC2Q9BWH2 189 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ITPAQ9BY32 194 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UFSP2Q9NUQ7 469 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TOR4AQ9NXH8 423 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CDH22Q9UJ99 828 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PYCARDQ9ULZ3 195 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HIF3AQ9Y2N7 669 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UBIAD1Q9Y5Z9 338 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HS3ST3A1Q9Y663 406 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 R4GN57 208 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NYNRINQ9P2P1 1898 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HIVEP3Q5T1R4 2406 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ABCD4O14678 606 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PIP5K1CO60331 668 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DEDDO75618 318 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CTXN2P0C2S0 81 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZDHHC11BP0C7U3 371 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GALP22466 123 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MANFP55145 182 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GP2P55259 537 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DNAJB13P59910 316 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TARDBPQ13148 414 aaKnown RBP eCLIP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 VEZF1Q14119 521 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MLC1Q15049 377 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CRB2Q5IJ48 1285 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF14Q5SWL7 426 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms