RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ZNF721Q8TF20 911 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 VSTM2LQ96N03 204 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 OR7D2Q96RA2 312 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 LMF2Q9BU23 707 aaKnown RBP13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 EFHD1Q9BUP0 239 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ZNF700Q9H0M5 742 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 PIGUQ9H490 435 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 CALML5Q9NZT1 146 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 ANGPT4Q9Y264 503 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
NIPAL3-202ENST00000339255 A8MUA0 341 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 C5orf58C9J3I9 102 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 MSX2P35548 267 aaPredicted RBP13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 MAP3K8P41279 467 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 CASP9P55211 416 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 ACTR3P61158 418 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 DCAF7P61962 342 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 CDK6Q00534 326 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 DUSP8Q13202 625 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 MYBPC3Q14896 1274 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 PRAMEF8Q5VWM4 474 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 PRAMEF7Q5VXH5 474 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 C16orf62Q7Z3J2 963 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC16A11Q8NCK7 471 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 SIMC1Q8NDZ2 872 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 HIPK4Q8NE63 616 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 OR52E4Q8NGH9 312 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 OR5D16Q8NGK9 328 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC38A5Q8WUX1 472 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC9A6Q92581 669 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 RAB8BQ92930 207 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 VMP1Q96GC9 406 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 C16orf58Q96GQ5 468 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 IP6K3Q96PC2 410 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 BTBD9Q96Q07 612 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 PCDHAC1Q9H158 963 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 GORASP2Q9H8Y8 452 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
NIPAL3-202ENST00000339255 IGHV1-45A0A0A0MS14 117 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 CXCR6O00574 342 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 SEC24DO94855 1032 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 SORBS2O94875 1100 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 CLPSP04118 112 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NUDT7P0C024 238 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 OR12D1P0DN82 309 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 PLA2G5P39877 138 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 GPR143P51810 404 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 POLE2P56282 527 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 MS4A2Q01362 244 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 FOXC1Q12948 553 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 SCARB2Q14108 478 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 EXT1Q16394 746 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC29A4Q7RTT9 530 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 RAB43Q86YS6 212 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 GOLM1Q8NBJ4 401 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 C17orf47Q8NEP4 570 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NFAM1Q8NET5 270 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 OR8K3Q8NH51 312 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 MAL2Q969L2 176 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NCLNQ969V3 563 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 TRNT1Q96Q11 434 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 YIPF4Q9BSR8 244 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 GPN2Q9H9Y4 310 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 Q9N2J8 555 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 GMPR2Q9P2T1 348 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 TRABD2BA6NFA1 517 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NKX2-2O95096 273 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 IFNA14P01570 189 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 TFPTP0C1Z6 253 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NR2F1P10589 423 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 ACP2P11117 423 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 CRISP3P54108 245 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 HPCAP84074 193 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 EEF1A2Q05639 463 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 ELOAQ14241 798 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 PCOLCEQ15113 449 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 DUSP5Q16690 384 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 HLA-DQA1Q5Y7H0 255 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 PLAG1Q6DJT9 500 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 HEPHL1Q6MZM0 1159 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 KIRREL2Q6UWL6 708 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 COX18Q8N8Q8 333 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 APCDD1LQ8NCL9 501 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 CHDHQ8NE62 594 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 DOK4Q8TEW6 326 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 WDR60Q8WVS4 1066 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 FIG4Q92562 907 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 C8orf44Q96CB5 159 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 NUDT9Q9BW91 350 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms