RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PROM1O43490 865 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 FGF18O76093 207 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RASGRP1O95267 797 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ADRB1P08588 477 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SPAM1P38567 509 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RAB13P51153 203 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 MEF2AQ02078 507 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SERTAD2Q14140 314 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 LSRQ86X29 649 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 MEX3DQ86XN8 651 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 KRT78Q8N1N4 520 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 NFKBIDQ8NI38 313 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SCAMP4Q969E2 229 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 S100PBPQ96BU1 408 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 FUZQ9BT04 418 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SGK2Q9HBY8 427 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ZFP64Q9NPA5 681 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 PTGFRNQ9P2B2 879 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 KLF15Q9UIH9 416 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 YY2O15391 372 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 KHDRBS3O75525 346 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SLC11A1P49279 550 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 AGFG1P52594 562 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SF3A2Q15428 464 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 KLHL26Q53HC5 615 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 FAM26DQ5JW98 314 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 TRMT11Q7Z4G4 463 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 LHFPL3Q86UP9 236 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 PTOV1Q86YD1 416 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 CFAP206Q8IYR0 622 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 NXPE1Q8N323 547 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ARL14EPQ8N8R7 260 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 AQP11Q8NBQ7 271 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 TRMT10AQ8TBZ6 339 aaKnown RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF707Q96C28 371 aaPredicted RBP11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SLC22A12Q96S37 553 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 MAP3K3Q99759 626 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 DPYSL5Q9BPU6 564 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 OR51B5Q9H339 312 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 EVA1AQ9H8M9 152 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 LHX3Q9UBR4 397 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 SRRDQ9UH36 339 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 FLVCR2Q9UPI3 526 aa11.23□□□□□ -0.61
LIMK2-202ENST00000333611 TRBV5-3A0A0A0MS03 114 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 A0A1B0GV90 55 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 LRIT2A6NDA9 550 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 H3BNC9 293 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SCAMP1O15126 338 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TLX2O43763 284 aaPredicted RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 PRPS1L1P21108 318 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 RPS26P62854 115 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CAMK1Q14012 370 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 PUM1Q14671 1186 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 COX20Q5RI15 118 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CMIPQ8IY22 773 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SGK3Q96BR1 496 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 INTS12Q96CB8 462 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SORCS2Q96PQ0 1159 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZCCHC4Q9H5U6 513 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TMEM138Q9NPI0 162 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CTSFQ9UBX1 484 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZFR2Q9UPR6 939 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF670-ZNF695F2Z2N8 137 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 LANCL1O43813 399 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 OR10H3O60404 316 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 HCN1O60741 890 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CSO75390 466 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 EIF3GO75821 320 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 LALBAP00709 142 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 F11P03951 625 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CKMP06732 381 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 UCHL1P09936 223 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ANKRD34CP0C6C1 535 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 NR2F6P10588 404 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CELP19835 753 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 DEFA6Q01524 100 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 MC1RQ01726 317 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TDGQ13569 410 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ALKBH1Q13686 389 aaKnown RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 RAB33AQ14088 237 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 GPRC6AQ5T6X5 926 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms