RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 AHSGP02765 367 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CDKN2DP55273 166 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 INHBEP58166 350 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NANOGP8Q6NSW7 305 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 IL20RBQ6UXL0 311 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SUMF2Q8NBJ7 301 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZNF516Q92618 1163 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 GIMAP5Q96F15 307 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PSD2Q9BQI7 771 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NANOGQ9H9S0 305 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ADAMTS13Q76LX8 1427 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 POU6F2P78424 691 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZNF585AQ6P3V2 769 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 TFGQ92734 400 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 SEZ6LQ9BYH1 1024 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 TSPAN10Q9H1Z9 355 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 PLEKHA3Q9HB20 300 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 RANGRFQ9HD47 186 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 NLGN3Q9NZ94 848 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PUS1Q9Y606 427 aaKnown RBP eCLIP7.54□□□□□ -1.2
CIITA-201ENST00000324288 DOCK6Q96HP0 2047 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SOCS6O14544 535 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 JMJD7P0C870 316 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 GKN3PP0CG01 181 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SLC2A5P22732 501 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 MYF6P23409 242 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CLINT1Q14677 625 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 RFTN1Q14699 578 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZNF630Q2M218 657 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZNF572Q7Z3I7 529 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 DBF4BQ8NFT6 615 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 BCL9O00512 1426 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 LOC105369274A0A096LPK9 316 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 A6NCN8 305 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ARGFXA6NJG6 315 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 USP2O75604 605 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 DIRAS3O95661 229 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SELENOVP59797 346 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ZXDBP98169 803 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CDK3Q00526 305 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 C14orf28Q4W4Y0 310 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 OR4N4Q8N0Y3 316 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 HPSE2Q8WWQ2 592 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 HAPLN3Q96S86 360 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NIFKQ9BYG3 293 aaKnown RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NFS1Q9Y697 457 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 A0A0D9SEW6 157 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 F5H5P2 479 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 TOR1AO14656 332 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SEC14L5O43304 696 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 HTR7P34969 479 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PEA15Q15121 130 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 TLDC1Q6P9B6 456 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PITX2Q99697 317 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PIP5K1AQ99755 562 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 CRB3Q9BUF7 120 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PPA2Q9H2U2 334 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 H0Y8G0 127 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 AK4P27144 223 aaPredicted RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 DCKP27707 260 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ETV3P41162 512 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 COQ5Q5HYK3 327 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 AGAP7PQ5VUJ5 663 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 AGAP6Q5VW22 663 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 BORCS7Q96B45 105 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SGCZQ96LD1 299 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 AGAP4Q96P64 663 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 MGLLQ99685 303 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 FTSJ1Q9UET6 329 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 YIPF1Q9Y548 306 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 DENRO43583 198 aaKnown RBP7.54□□□□□ -1.2
CIITA-201ENST00000324288 SNAPC5O75971 98 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SLC22A5O76082 557 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 ABRAXAS2Q15018 415 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 PLBD1Q6P4A8 553 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 BORAQ6PGQ7 559 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 SMPDL3AQ92484 453 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 MAL2Q969L2 176 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 NEDD4LQ96PU5 975 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 MICU1Q9BPX6 476 aa7.54□□□□□ -1.2
CIITA-201ENST00000324288 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 SOWAHBA6NEL2 793 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 HOXB2P14652 356 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 RPS10P46783 165 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 HNRNPFP52597 415 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 TECPR1Q7Z6L1 1165 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 OR52E2Q8NGJ4 325 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 TRUB1Q8WWH5 349 aaKnown RBP7.53□□□□□ -1.2
CIITA-201ENST00000324288 PLCXD1Q9NUJ7 323 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 ASB6Q9NWX5 421 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 PPP5CP53041 499 aa7.53□□□□□ -1.2
CIITA-201ENST00000324288 HTD2P86397 168 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms