RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CNIH4Q9P003 139 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 MYO5AQ9Y4I1 1855 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 TMEM14AQ9Y6G1 99 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 HYKKA2RU49 373 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
SPAST-201ENST00000315285 SHC2P98077 582 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 APOFQ13790 326 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 NTRK2Q16620 822 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 B3GNT8Q7Z7M8 397 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 TMPRSS12Q86WS5 348 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 ZNF480Q8WV37 535 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 OR4K3Q96R72 315 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 NLKQ9UBE8 527 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 SH2B3Q9UQQ2 575 aa13.07□□□□□ -0.32
SPAST-201ENST00000315285 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 OR2B3O76000 313 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 CFIP05156 583 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 CDK1P06493 297 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PIM1P11309 404 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 ITGB7P26010 798 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 RELAQ04206 551 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 SGCBQ16585 318 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 FIGLAQ6QHK4 219 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 Q6ZSR9 355 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 GDPD1Q8N9F7 314 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 Q8N9G6 341 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 DTD2Q96FN9 168 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 TMEM41AQ96HV5 264 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ZNF583Q96ND8 569 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ZNF559Q9BR84 538 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 SLC46A2Q9BY10 475 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 MAB21L2Q9Y586 359 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 LAMB1P07942 1786 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 OR7A17O14581 309 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 IFNA21P01568 189 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PARS2Q7L3T8 475 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 ARMCX6Q7L4S7 300 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PELI3Q8N2H9 469 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 TMEM156Q8N614 296 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 METTL25Q8N6Q8 603 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 CYP8B1Q9UNU6 501 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 MYO10Q9HD67 2058 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ZSCAN5BA6NJL1 495 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ZNF208O43345 1280 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 ADAMTS4O75173 837 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 TIMP2P16035 220 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 TACR1P25103 407 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PDHA2P29803 388 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 NTSR1P30989 418 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 SOX3P41225 446 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 GNG2P59768 71 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 SLC7A9P82251 487 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 DSC1Q08554 894 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 TMEM234Q8WY98 164 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 SAMD8Q96LT4 415 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 SAMD11Q96NU1 681 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PCP4L1A6NKN8 68 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 CERS1P27544 350 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 MC3RP41968 323 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 NKX2-5P52952 324 aaPredicted RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 PTPRRQ15256 657 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 HNRNPA1L2Q32P51 320 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 TIGD4Q8IY51 512 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 WDR20Q8TBZ3 569 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
SPAST-201ENST00000315285 NANSQ9NR45 359 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
SPAST-201ENST00000315285 COL18A1P39060 1754 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 LRRTM2O43300 516 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 GTF2F2P13984 249 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PRKCAP17252 672 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 DNASE1P24855 282 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
SPAST-201ENST00000315285 GRPRP30550 384 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 PHF19Q5T6S3 580 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 DCDC5Q6ZRR9 648 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 FUNDC1Q8IVP5 155 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 OR5D16Q8NGK9 328 aa13.05□□□□□ -0.32
SPAST-201ENST00000315285 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms